RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 MED27Q6P2C8 311 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 RPS27LQ71UM5 84 aaKnown RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 ZCCHC7Q8N3Z6 543 aaKnown RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 TBC1D19Q8N5T2 526 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 TEX9Q8N6V9 391 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 EFCAB3Q8N7B9 438 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 PTGR2Q8N8N7 351 aaPredicted RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 ACOT4Q8N9L9 421 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 SNX31Q8N9S9 440 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 TM9SF4Q92544 642 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 ANKRD9Q96BM1 317 aaPredicted RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 C11orf24Q96F05 449 aaPredicted RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 SCMH1Q96GD3 660 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 VPS50Q96JG6 964 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 SIGLEC12Q96PQ1 595 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 MAPKAP1Q9BPZ7 522 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 SORBS1Q9BX66 1292 aaKnown RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 VPS11Q9H270 941 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 LYRM4Q9HD34 91 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 C19orf25Q9UFG5 118 aaPredicted RBP10.53□□□□□ -0.72
CLCC1-201ENST00000302500 CENPEQ02224 2701 aa10.53□□□□□ -0.72
CLCC1-201ENST00000302500 OR5H15A6NDH6 313 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 ANKDD1BA6NHY2 528 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 POC1B-GALNT4F8VUJ3 575 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 FOXE1O00358 373 aaPredicted RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 TMPRSS11DO60235 418 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 H2AFYO75367 372 aaKnown RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 KRT38O76015 456 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 TGFB1P01137 390 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 SNRPAP09012 282 aaKnown RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 EEF1DP29692 281 aaKnown RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 SERPINB1P30740 379 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 TRHRP34981 398 aaPredicted RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 MSH2P43246 934 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 HNRNPH2P55795 449 aaKnown RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 CUL3Q13618 768 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 TUBA3CQ13748 450 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 TSNAXIP1Q2TAA8 658 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 BTBD16Q32M84 506 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 PAGE2BQ5JRK9 111 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 ACER2Q5QJU3 275 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 FCRLBQ6BAA4 426 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 LETMD1Q6P1Q0 360 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 TUBA3EQ6PEY2 450 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 TDRPQ86YL5 185 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 CHERPQ8IWX8 916 aaKnown RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 ZNF595Q8IYB9 648 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 CYP4X1Q8N118 509 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 BEST3Q8N1M1 668 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 DNAJB14Q8TBM8 379 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 GRHL3Q8TE85 626 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 PTPMT1Q8WUK0 201 aaPredicted RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 FAR1Q8WVX9 515 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 METTL21AQ8WXB1 218 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 PTCHD1Q96NR3 888 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 KCNC2Q96PR1 638 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 CDK15Q96Q40 435 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 MRPL57Q9BQC6 102 aaKnown RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 TBCDQ9BTW9 1192 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 OR51B5Q9H339 312 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 EPS8L2Q9H6S3 715 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 DDX31Q9H8H2 851 aaKnown RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 IPPKQ9H8X2 491 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 SLAMF7Q9NQ25 335 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 VTI1BQ9UEU0 232 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 G3BP2Q9UN86 482 aaKnown RBP10.52□□□□□ -0.73
CLCC1-201ENST00000302500 ASB4Q9Y574 426 aa10.52□□□□□ -0.73
CLCC1-201ENST00000302500 EXOC1LA0A1B0GW35 172 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 ASPDHA6ND91 283 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 G3V2L1 256 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 CDK2AP1O14519 115 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 ZNF354AO60765 605 aaPredicted RBP10.51□□□□□ -0.73
CLCC1-201ENST00000302500 CTNSO60931 367 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 EEDO75530 441 aaKnown RBP10.51□□□□□ -0.73
CLCC1-201ENST00000302500 DDAH2O95865 285 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 CLPSP04118 112 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 IGKV3-11P04433 115 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 RBP1P09455 135 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 CD96P40200 585 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 OR4D2P58180 307 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 MLF1P58340 268 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 RPS13P62277 151 aaKnown RBP10.51□□□□□ -0.73
CLCC1-201ENST00000302500 SKP1P63208 163 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 GTF3C1Q12789 2109 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 UBAP2LQ14157 1087 aaKnown RBP10.51□□□□□ -0.73
CLCC1-201ENST00000302500 INAQ16352 499 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 UNC50Q53HI1 259 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 TRIM40Q6P9F5 258 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 DGAT2L6Q6ZPD8 337 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 LCA5Q86VQ0 697 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 FAM47BQ8NA70 645 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 ST6GALNAC3Q8NDV1 305 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 B3GNT7Q8NFL0 401 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 ADAMTS18Q8TE60 1221 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 UCN3Q969E3 161 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 MTBPQ96DY7 904 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 CMTM7Q96FZ5 175 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 TMEM237Q96Q45 408 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 LPAR4Q99677 370 aa10.51□□□□□ -0.73
CLCC1-201ENST00000302500 HES7Q9BYE0 225 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms