RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 AIG1Q9NVV5 245 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 NMRK1Q9NWW6 199 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 AHSPQ9NZD4 102 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 CES1P1Q9UKY3 287 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 SRPK3Q9UPE1 567 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 TMED5Q9Y3A6 229 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 PCDHGA7Q9Y5G6 932 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 VSTM2BA6NLU5 285 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 TGFBR3LH3BV60 316 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 SPTBN2O15020 2390 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 PGRMC2O15173 223 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CPNE3O75131 537 aaKnown RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 JRKO75564 520 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CAPNS1P04632 268 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ANXA4P09525 319 aaPredicted RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 GPX3P22352 226 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 RAP1GDS1P52306 607 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CBX1P83916 185 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 DSG2Q14126 1118 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ERV3-1Q14264 604 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 PTGR1Q14914 329 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 NKAIN1Q4KMZ8 207 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CCNYL2Q5T2Q4 361 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 METTL21CQ5VZV1 264 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 MRPL14Q6P1L8 145 aaKnown RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 PRMT9Q6P2P2 845 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CYP20A1Q6UW02 462 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CFAP47Q6ZTR5 3102 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 SPATA19Q7Z5L4 167 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 FUNDC1Q8IVP5 155 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 LIX1Q8N485 282 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 GALNT6Q8NCL4 622 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 PROKR1Q8TCW9 393 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ULBP3Q9BZM4 244 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 MYLK2Q9H1R3 596 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CLK4Q9HAZ1 481 aaKnown RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 ZNF304Q9HCX3 659 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 LYRM4Q9HD34 91 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 PFDN4Q9NQP4 134 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 SAR1AQ9NR31 198 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 SDR39U1Q9NRG7 319 aaPredicted RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 IRAK4Q9NWZ3 460 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 HCN3Q9P1Z3 774 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CTSFQ9UBX1 484 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ACSL6Q9UKU0 697 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ERVK-11Q9UQG0 969 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 COPG1Q9Y678 874 aaKnown RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 A0A1W2PS29 197 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ARHGAP10A1A4S6 786 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 UBDO15205 165 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 KLF7O75840 302 aaPredicted RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 BMP10O95393 424 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 RECKO95980 971 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 F8A1P23610 371 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 SOX18P35713 384 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CLDN8P56748 225 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 C21orf58P58505 322 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 TAS2R50P59544 299 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 UFM1P61960 85 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 TRA2BP62995 288 aaKnown RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 PHC1P78364 1004 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 TGM3Q08188 693 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ABHD18Q0P651 414 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 PDE7AQ13946 482 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 SLC9A5Q14940 896 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ZNF385BQ569K4 471 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 VWA2Q5GFL6 755 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 NXNQ6DKJ4 435 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CYB5D1Q6P9G0 228 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 FAM198BQ6UWH4 519 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ACAD11Q709F0 780 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 OVCH1Q7RTY7 1134 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 PAGE2Q7Z2X7 111 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 GPR180Q86V85 440 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ZC3H7AQ8IWR0 971 aaKnown RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 CPSF7Q8N684 471 aaKnown RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 KRTCAP2Q8N6L1 136 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ANKS4BQ8N8V4 417 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 OR51Q1Q8NH59 317 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CLHC1Q8NHS4 586 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 DNAJB14Q8TBM8 379 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CLIP3Q96DZ5 547 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 PEX11GQ96HA9 241 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CATSPER2Q96P56 530 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 TSSK3Q96PN8 268 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 MESP1Q9BRJ9 268 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 TMEM121BQ9BXQ6 578 aaPredicted RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 TGIF2Q9GZN2 237 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 ROGDIQ9GZN7 287 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 NMUR2Q9GZQ4 415 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 CHST8Q9H2A9 424 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 SLC26A1Q9H2B4 701 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 MYNNQ9NPC7 610 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 NOP53Q9NZM5 478 aaKnown RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 NDOR1Q9UHB4 597 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 FBXW2Q9UKT8 454 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 G3BP2Q9UN86 482 aaKnown RBP8.95□□□□□ -0.98
RFX3-201ENST00000302303 MAP4K5Q9Y4K4 846 aa8.95□□□□□ -0.98
RFX3-201ENST00000302303 PCDHA9Q9Y5H5 950 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms