RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TALDO1P37837 337 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 FAM214AQ32MH5 1076 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 CCDC149Q6ZUS6 474 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 HSD11B1LQ7Z5J1 315 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 BCDIN3DQ7Z5W3 292 aaKnown RBP13.47□□□□□ -0.25
SDC2-201ENST00000302190 KCT2Q8NC54 265 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 OR10G6Q8NH81 332 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 C2orf15Q8WU43 125 aaKnown RBP13.47□□□□□ -0.25
SDC2-201ENST00000302190 IPCEF1Q8WWN9 437 aaPredicted RBP13.47□□□□□ -0.25
SDC2-201ENST00000302190 ACOT13Q9NPJ3 140 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 RPRD1BQ9NQG5 326 aaKnown RBP13.47□□□□□ -0.25
SDC2-201ENST00000302190 ENOPH1Q9UHY7 261 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 WDR87Q6ZQQ6 2873 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 SNTNA6NMZ2 147 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 PCDH17O14917 1159 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 ACP5P13686 325 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 AMD1P17707 334 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 CENPAP49450 140 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 ISL1P61371 349 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 ZNF763Q0D2J5 394 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 PLEKHG7Q6ZR37 379 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 COMMD6Q7Z4G1 85 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 IQCHQ86VS3 1027 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 TSPYL5Q86VY4 417 aaPredicted RBP13.47□□□□□ -0.25
SDC2-201ENST00000302190 TEX47Q8TBZ9 253 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 PCDHGA10Q9Y5H3 936 aa13.47□□□□□ -0.25
SDC2-201ENST00000302190 TDRD15B5MCY1 1934 aaKnown RBP13.46□□□□□ -0.25
SDC2-201ENST00000302190 TRIOBPQ9H2D6 2365 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 HLA-FP30511 346 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 GP2P55259 537 aaKnown RBP13.46□□□□□ -0.25
SDC2-201ENST00000302190 PRMT2P55345 433 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 NFE2L1Q14494 772 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 LAPTM4BQ86VI4 370 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 C10orf111Q8N326 155 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 BCL7CQ8WUZ0 217 aaPredicted RBP13.46□□□□□ -0.25
SDC2-201ENST00000302190 EID2BQ96D98 161 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 CASD1Q96PB1 797 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 FCRL4Q96PJ5 515 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 PDFQ9HBH1 243 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 RP1L1Q8IWN7 2480 aaPredicted RBP13.46□□□□□ -0.25
SDC2-201ENST00000302190 FRS3O43559 492 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 PCDHGA12O60330 932 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 CAPNS1P04632 268 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 SUOXP51687 545 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 CLCNKAP51800 687 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 SGCGQ13326 291 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 QPRTQ15274 297 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 CEP78Q5JTW2 689 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 ASB18Q6ZVZ8 466 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 LHFPL3Q86UP9 236 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 FAM83FQ8NEG4 500 aaPredicted RBP13.46□□□□□ -0.25
SDC2-201ENST00000302190 ZCCHC10Q8TBK6 192 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 BTN2A2Q8WVV5 523 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 MBOAT4Q96T53 435 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 C17orf62Q9BQA9 187 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 CPPED1Q9BRF8 314 aaPredicted RBP13.46□□□□□ -0.25
SDC2-201ENST00000302190 TTYH2Q9BSA4 534 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 TMED9Q9BVK6 235 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 MCOLN1Q9GZU1 580 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 OR51V1Q9H2C8 321 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 RLIMQ9NVW2 624 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 POFUT2Q9Y2G5 429 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 HCN4Q9Y3Q4 1203 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 SPEF1Q9Y4P9 236 aa13.46□□□□□ -0.25
SDC2-201ENST00000302190 DLGAP1O14490 977 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 TNRC18O15417 2968 aaPredicted RBP13.46□□□□□ -0.26
SDC2-201ENST00000302190 SLC31A1O15431 190 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 SEC14L2O76054 403 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 CCNYL3P0C7X3 344 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 PSKH1P11801 424 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 AOAHP28039 575 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 CSTF2P33240 577 aaKnown RBP eCLIP13.46□□□□□ -0.263e-6■■■□□ 17.6
SDC2-201ENST00000302190 HBA1P69905 142 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 ACVR1Q04771 509 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 PIN1Q13526 163 aaPredicted RBP13.46□□□□□ -0.26
SDC2-201ENST00000302190 RGNQ15493 299 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 SMU1Q2TAY7 513 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 SPATS1Q496A3 300 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 C7orf61Q8IZ16 206 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 TIFAQ96CG3 184 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 AIF1LQ9BQI0 150 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 SLC12A9Q9BXP2 914 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 TRIT1Q9H3H1 467 aaKnown RBP13.46□□□□□ -0.26
SDC2-201ENST00000302190 C11orf49Q9H6J7 331 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 IL37Q9NZH6 218 aa13.46□□□□□ -0.26
SDC2-201ENST00000302190 DOCK6Q96HP0 2047 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 SAGE2PA6NJ88 616 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 H3BSH0 61 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 WWP2O00308 870 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 CLTBP09497 229 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 CA5AP35218 305 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 DGKGP49619 791 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 PPP2R2BQ00005 443 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 COX20Q5RI15 118 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 DESI1Q6ICB0 168 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 ZNF852Q6ZMS4 543 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.45□□□□□ -0.26
SDC2-201ENST00000302190 TBC1D19Q8N5T2 526 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 MINDY2Q8NBR6 621 aa13.45□□□□□ -0.26
SDC2-201ENST00000302190 WDR48Q8TAF3 677 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms