RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 APOLD1Q96LR9 279 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TMEM109Q9BVC6 243 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 WDR26Q9H7D7 661 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 SCML2Q9UQR0 700 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 ZNF850A8MQ14 1090 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 GSTM3P21266 225 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 RPL10P27635 214 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 GJD2Q9UKL4 321 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 SIGLEC1Q9BZZ2 1709 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 RIC1Q4ADV7 1423 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ANKRD63C9JTQ0 380 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC35G4P0C7Q5 338 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 HTR1BP28222 390 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ZNF157P51786 506 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 RANP62826 216 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 LRRC55Q6ZSA7 311 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 RHOUQ7L0Q8 258 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ZNRF4Q8WWF5 429 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 MRI1Q9BV20 369 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ERVK13-1Q9NX77 482 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 LUZP4Q9P127 313 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 LRRK1Q38SD2 2015 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 C2orf72A6NCS6 295 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 TNFSF12O43508 249 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 CREMQ03060 361 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PHYHD1Q5SRE7 291 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 UNC5BQ8IZJ1 945 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 C14orf119Q9NWQ9 140 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 MED6O75586 246 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 CTBP1Q13363 440 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 CST9LP1Q5W188 147 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 FAM185AQ8N0U4 392 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 EXOSC8Q96B26 276 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 BTBD1Q9H0C5 482 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 TKTL2Q9H0I9 626 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ZNF510Q9Y2H8 683 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 TET1Q8NFU7 2136 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 AQP12BA6NM10 295 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PCSK2P16519 638 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC36A4Q6YBV0 504 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 NLGN2Q8NFZ4 835 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 C10orf82Q8WW14 230 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 POMCP01189 267 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 SFT2D3Q587I9 215 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PNPLA2Q96AD5 504 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 OCSTAMPQ9BR26 566 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ABI3Q9P2A4 366 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 TMEM235A6NFC5 223 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 VSTM5A8MXK1 200 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 NUPL2O15504 423 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ADRB2P07550 413 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 AKR1C2P52895 323 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 MLC1Q15049 377 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PAN3Q58A45 887 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 TMEM236Q5W0B7 351 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 P4HA3Q7Z4N8 544 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 BOLLQ8N9W6 283 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 HRH4Q9H3N8 390 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ZDHHC11Q9H8X9 412 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 OAZ3Q9UMX2 235 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 BDH1Q02338 343 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 GRIN2CQ14957 1233 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 C17orf64Q86WR6 236 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 OR5H2Q8NGV7 314 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PRORSD1PA6NEY8 169 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 H1F0P07305 194 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 RFC3P40938 356 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 EIF2DP41214 584 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 HSPB3Q12988 150 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ENPP2Q13822 863 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 GANABQ14697 944 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ARHGAP19Q14CB8 494 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 RNASE10Q5GAN6 216 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 COMMD1Q8N668 190 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 CERKQ8TCT0 537 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 BLNKQ8WV28 456 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 MKKSQ9NPJ1 570 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 DNAJB9Q9UBS3 223 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 UBE2J1Q9Y385 318 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 RICTORQ6R327 1708 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 LMO7Q8WWI1 1683 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PPP1R2P9O14990 202 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ONECUT3O60422 494 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 LAPTM5Q13571 262 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 POM121L1PQ3SYA9 428 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 CLVS2Q5SYC1 327 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PACRGLQ8N7B6 248 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ZBED6CLQ96FA7 236 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC6A17Q9H1V8 727 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PATZ1Q9HBE1 687 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 KIF25Q9UIL4 384 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 PDCD11Q14690 1871 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 BTNL10A8MVZ5 291 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 ARL2P36404 184 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 NUDT1P36639 197 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 GID4Q8IVV7 300 aa10.8□□□□□ -0.68
HDGFL3-201ENST00000299633 NFKBIDQ8NI38 313 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms