RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 GAB1Q13480 694 aa12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 MFSD13AQ14CX5 517 aa12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 GPRC6AQ5T6X5 926 aa12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 SERPINA9Q86WD7 417 aa12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 AQP11Q8NBQ7 271 aa12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 B3GALT6Q96L58 329 aa12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 MAGEB10Q96LZ2 347 aaPredicted RBP12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 COPS8Q99627 209 aa12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 MAGEH1Q9H213 219 aa12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 PCDHGB7Q9Y5F8 929 aa12.94□□□□□ -0.34
RPUSD4-201ENST00000298317 FAM240BA0A1B0GVZ2 78 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 ORC5O43913 435 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 PCDH7O60245 1069 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 OR4Q2P0C623 313 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 LAMP1P11279 417 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 XCR1P46094 333 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 MRPL28Q13084 256 aaKnown RBP12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 TEX261Q6UWH6 196 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 ABI3BPQ7Z7G0 1075 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 NAGSQ8N159 534 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 Q8N402 240 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 L3MBTL4Q8NA19 623 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 GALNT11Q8NCW6 608 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 AP3S1Q92572 193 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 AKAP1Q92667 903 aaKnown RBP eCLIP12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 EID2BQ96D98 161 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 SLC6A18Q96N87 628 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 ZIC5Q96T25 663 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 NELL2Q99435 816 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 CCSER2Q9H7U1 834 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 GALNT9Q9HCQ5 603 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 FLRT1Q9NZU1 646 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 SNX11Q9Y5W9 270 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 U3KQ87 197 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 ACSL4O60488 711 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 RFPL3O75679 317 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 ANXA5P08758 320 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 RPL17P18621 184 aaKnown RBP12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 TNNI3P19429 210 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 TACR2P21452 398 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 GPR15P49685 360 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 MADCAM1Q13477 382 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 ELOAQ14241 798 aaKnown RBP12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 C22orf42Q6IC83 251 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 LRRC70Q7Z2Q7 622 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 RBFAQ8N0V3 343 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 CFAP52Q8N1V2 620 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 TMEM145Q8NBT3 493 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 PIH1D2Q8WWB5 315 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 IL4I1Q96RQ9 567 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 KCNJ15Q99712 375 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 PIP5K1AQ99755 562 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 FBXO44Q9H4M3 255 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 POLMQ9NP87 494 aaPredicted RBP12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 B3GAT2Q9NPZ5 323 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 NDOR1Q9UHB4 597 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 BTNL2Q9UIR0 455 aa12.93□□□□□ -0.34
RPUSD4-201ENST00000298317 TLR4O00206 839 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 TNFRSF21O75509 655 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 ZXDCQ2QGD7 858 aaPredicted RBP12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 ANKRD54Q6NXT1 300 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 TMEM65Q6PI78 240 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 ZNF730Q6ZMV8 503 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 CLDN19Q8N6F1 224 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 DUSP26Q9BV47 211 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 KATNB1Q9BVA0 655 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 SPNS1Q9H2V7 528 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 CRISPLD1Q9H336 500 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 SERHL2Q9H4I8 314 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 MARCH2Q9P0N8 246 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 UPK3BL1B0FP48 263 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 UPK3BL2E5RIL1 263 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 GAPDHSO14556 408 aaPredicted RBP12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 KDELR3O43731 214 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 PLOD3O60568 738 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 TSC22D2O75157 780 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 GASTP01350 101 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 CPEP16870 476 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 ATF6P18850 670 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 SDC2P34741 201 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 TALDO1P37837 337 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 CPT1AP50416 773 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 ETV1P50549 477 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 PPP3R1P63098 170 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 ZNF91Q05481 1191 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 C1DQ13901 141 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 SPRYD7Q5W111 196 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 ZNF770Q6IQ21 691 aaPredicted RBP12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 PAQR6Q6TCH4 344 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 GHDCQ8N2G8 530 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 ZNF680Q8NEM1 530 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 TCF25Q9BQ70 676 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 TMEM43Q9BTV4 400 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 LATS2Q9NRM7 1088 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 MRPL39Q9NYK5 338 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 DNAJC27Q9NZQ0 273 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 ATP6V1HQ9UI12 483 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms