RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 FAM221BA6H8Z2 402 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 MAP3K13O43283 966 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 ERI3O43414 337 aaKnown RBP13.57□□□□□ -0.24
C9orf3-202ENST00000297979 AHCYL1O43865 530 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 KCNK5O95279 499 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 ZNF26P17031 533 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-202ENST00000297979 POLR2CP19387 275 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-202ENST00000297979 CD38P28907 300 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 ALDH9A1P49189 494 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 ARFIP1P53367 373 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 CHRNB3Q05901 458 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 C1orf61Q13536 156 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 VMACQ2NL98 169 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 TJAP1Q5JTD0 557 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 TOR1AIP1Q5JTV8 583 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 CAMKK1Q8N5S9 505 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 POP5Q969H6 163 aaKnown RBP13.57□□□□□ -0.24
C9orf3-202ENST00000297979 MACROD1Q9BQ69 325 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 LRRC61Q9BV99 259 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 COQ10BQ9H8M1 238 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 DCAF13Q9NV06 445 aaKnown RBP13.57□□□□□ -0.24
C9orf3-202ENST00000297979 TAS2R9Q9NYW1 312 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 NUP214P35658 2090 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-202ENST00000297979 A0A1W2PR77 199 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 PPM1DO15297 605 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 WNT1P04628 370 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 FESP07332 822 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 HSPA13P48723 471 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 RPL6Q02878 288 aaKnown RBP13.56□□□□□ -0.24
C9orf3-202ENST00000297979 ATP6AP1Q15904 470 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 ENPP6Q6UWR7 440 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 SFTPA2Q8IWL1 248 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.56□□□□□ -0.24
C9orf3-202ENST00000297979 CLEC4FQ8N1N0 589 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 NATD1Q8N6N6 113 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 LINC00469Q8N7U9 141 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 OR2L5Q8NG80 312 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 NETO1Q8TDF5 533 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 ZNF764Q96H86 408 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-202ENST00000297979 KCNC2Q96PR1 638 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 SLC35A5Q9BS91 424 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 SYNPO2LQ9H987 977 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 OR2A25A4D2G3 310 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 MT-ND1P03886 318 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 MAGP20916 626 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 CCT8P50990 548 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 RGNQ15493 299 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 ZNF793Q6ZN11 406 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 PTOV1Q86YD1 416 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 UBALD2Q8IYN6 164 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 ARL6IP6Q8N6S5 226 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 FAM86B1Q8N7N1 296 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 AMER3Q8N944 861 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 SRFBP1Q8NEF9 429 aaKnown RBP13.56□□□□□ -0.24
C9orf3-202ENST00000297979 IPCEF1Q8WWN9 437 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-202ENST00000297979 CHST8Q9H2A9 424 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 OLAHQ9NV23 265 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 TEX10Q9NXF1 929 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-202ENST00000297979 ENTPD2Q9Y5L3 495 aa13.56□□□□□ -0.24
C9orf3-202ENST00000297979 SAC3D1A6NKF1 404 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 C2orf74A8MZ97 194 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 C4orf51C9J302 202 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 H0YJX3 145 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 TNFSF14O43557 240 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 SERPINA1P01009 418 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 LDLRP01130 860 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 NTRK1P04629 796 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
C9orf3-202ENST00000297979 RACK1P63244 317 aaKnown RBP13.55□□□□□ -0.24
C9orf3-202ENST00000297979 FOLH1Q04609 750 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 TRIM40Q6P9F5 258 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 ABHD17CQ6PCB6 329 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 IQCHQ86VS3 1027 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 FAM46DQ8NEK8 389 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 ZDHHC1Q8WTX9 485 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 SLC47A1Q96FL8 570 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 DPH2Q9BQC3 489 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-202ENST00000297979 ANKMY1Q9P2S6 941 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 RAB26Q9ULW5 256 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 MDC1Q14676 2089 aaKnown RBP13.55□□□□□ -0.24
C9orf3-202ENST00000297979 TXNDC9O14530 226 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 PDPK1O15530 556 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 CKMT2P17540 419 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 HIST1H1TP22492 207 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-202ENST00000297979 MAOBP27338 520 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 RPS9P46781 194 aaKnown RBP13.55□□□□□ -0.24
C9orf3-202ENST00000297979 MED21Q13503 144 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 ADRM1Q16186 407 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 NRF1Q16656 503 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 INTS11Q5TA45 600 aaKnown RBP13.55□□□□□ -0.24
C9orf3-202ENST00000297979 ANGPTL8Q6UXH0 198 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 POM121Q96HA1 1249 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 Q9H521 79 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 PRDM7Q9NQW5 492 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 AK5Q9Y6K8 562 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 TRIOO75962 3097 aa13.55□□□□□ -0.24
C9orf3-202ENST00000297979 B4DGG1 531 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 AXIN1O15169 862 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 PRKD3O94806 890 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms