RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.93□□□□□ -0.34
HPS3-201ENST00000296051 ARHGAP40Q5TG30 622 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 KANK2Q63ZY3 851 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 ANKRD34AQ69YU3 496 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 MTG2Q9H4K7 406 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 HRASLS2Q9NWW9 162 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 TTC34A8MYJ7 566 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 KDELR3O43731 214 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 B4GALT2O60909 372 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 OAZ2O95190 189 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 JUNDP17535 347 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 RPS3P23396 243 aaKnown RBP eCLIP12.92□□□□□ -0.34
HPS3-201ENST00000296051 DCKP27707 260 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 CCKBRP32239 447 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 PREPP48147 710 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 RAB8AP61006 207 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ZNF267Q14586 743 aaPredicted RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 VMACQ2NL98 169 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 BTBD16Q32M84 506 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 AMIGO1Q86WK6 493 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ZFP41Q8N8Y5 198 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 MRPL43Q8N983 215 aaKnown RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 OR8J3Q8NGG0 315 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 RLN3Q8WXF3 142 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 POP5Q969H6 163 aaKnown RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 ITPKCQ96DU7 683 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 TEX37Q96LM6 180 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 RAB11FIP5Q9BXF6 653 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 OR51B5Q9H339 312 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 IL21RQ9HBE5 538 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 TNFRSF12AQ9NP84 129 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 A0A1B0GUL6 1792 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 TRAV6A0A075B6T7 132 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ZNF701M0R085 212 aaPredicted RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 MUSKO15146 869 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ERI3O43414 337 aaKnown RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 FHP07954 510 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ZNF30P17039 623 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 MLLT10P55197 1068 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 RCAN2Q14206 197 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 NDUFAF6Q330K2 333 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 GPRC6AQ5T6X5 926 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 LRRTM3Q86VH5 581 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 PIANPQ8IYJ0 282 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 SLC37A3Q8NCC5 494 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 KLHL6Q8WZ60 621 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ZNF717Q9BY31 904 aaPredicted RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 C8orf33Q9H7E9 229 aaPredicted RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 NECTIN3Q9NQS3 549 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 NUFIP1Q9UHK0 495 aaKnown RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 SPO11Q9Y5K1 396 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 GPR45Q9Y5Y3 372 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 A0A1W2PRB8 838 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 K7ERQ8 282 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ATP1B2P14415 290 aaPredicted RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 CD40LGP29965 261 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 CLCN4P51793 760 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 CDK6Q00534 326 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ZNF45Q02386 682 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 EIF4HQ15056 248 aaKnown RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 TUBA3EQ6PEY2 450 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ZNF613Q6PF04 617 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 CYP4V2Q6ZWL3 525 aaPredicted RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 CHPT1Q8WUD6 406 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 OVCA2Q8WZ82 227 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 KCNJ9Q92806 393 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 L3HYPDHQ96EM0 354 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 MMP28Q9H239 520 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 SERTAD3Q9UJW9 196 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 HCN2Q9UL51 889 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 KMOO15229 486 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 IL12BP29460 328 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ETV3P41162 512 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 SGCBQ16585 318 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 SLC8B1Q6J4K2 584 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 MARCH9Q86YJ5 346 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 PHC2Q8IXK0 858 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 TMEM151AQ8N4L1 468 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 PHOSPHO2Q8TCD6 241 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 PROKR1Q8TCW9 393 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 TMEM174Q8WUU8 243 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 KCTD7Q96MP8 289 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 ALPK1Q96QP1 1244 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 CCM2Q9BSQ5 444 aa12.92□□□□□ -0.34
HPS3-201ENST00000296051 MRM3Q9HC36 420 aaKnown RBP12.92□□□□□ -0.34
HPS3-201ENST00000296051 KHDRBS3O75525 346 aaKnown RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 UBXN7O94888 489 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 TOXO94900 526 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 PDYNP01213 254 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 SAGP10523 405 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 BMP4P12644 408 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 HOXB6P17509 224 aaKnown RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 SSTR4P31391 388 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 MEF2AQ02078 507 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 SLBPQ14493 270 aaKnown RBP eCLIP12.91□□□□□ -0.34
HPS3-201ENST00000296051 ELOCQ15369 112 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 ZNF805Q5CZA5 627 aa12.91□□□□□ -0.34
HPS3-201ENST00000296051 PTCRAQ6ISU1 281 aaPredicted RBP12.91□□□□□ -0.34
HPS3-201ENST00000296051 ZNF486Q96H40 463 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms