RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 SMYD1Q8NB12 490 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 OR52J3Q8NH60 311 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 LZICQ8WZA0 190 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 UCN3Q969E3 161 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 RIPOR3Q96MK2 946 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 GABRG3Q99928 467 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 C17orf62Q9BQA9 187 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 FGF22Q9HCT0 170 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 TEX10Q9NXF1 929 aaPredicted RBP13.34□□□□□ -0.27
NXF1-201ENST00000294172 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 BLOC1S6Q9UL45 172 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 PADI2Q9Y2J8 665 aa13.34□□□□□ -0.27
NXF1-201ENST00000294172 PDPK1O15530 556 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 ABCB7O75027 752 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 EPHA2P29317 976 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 SERPINB1P30740 379 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 CLK3P49761 638 aaKnown RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 MAPK10P53779 464 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 UAP1L1Q3KQV9 507 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 SPDYE7PQ495Y7 208 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 RD3Q7Z3Z2 195 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 UBE3DQ7Z6J8 389 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 SLC44A2Q8IWA5 706 aaPredicted RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 TTC29Q8NA56 475 aaPredicted RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 NRBF2Q96F24 287 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 DCUN1D5Q9BTE7 237 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 RAD21L1Q9H4I0 556 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 TMEM38AQ9H6F2 299 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 RMI1Q9H9A7 625 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 MRPS30Q9NP92 439 aaKnown RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 SCHIP1Q9P0W5 487 aaPredicted RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 RAB23Q9ULC3 237 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 CA5BQ9Y2D0 317 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 ZNF451Q9Y4E5 1061 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 GMPPBQ9Y5P6 360 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 POM121BA6NF01 834 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 SLC1A7O00341 560 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 XPNPEP2O43895 674 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 JRKO75564 520 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 CDK4P11802 303 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 HOXB3P14651 431 aaPredicted RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 PKLRP30613 574 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 CTHP32929 405 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 RYKP34925 604 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 DSTNP60981 165 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 CDK5R2Q13319 367 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 IL18R1Q13478 541 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 ZNF630Q2M218 657 aaPredicted RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 IFI44LQ53G44 452 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 TNFAIP8L2Q6P589 184 aaPredicted RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 CEACAM20Q6UY09 585 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 TSEN54Q7Z6J9 526 aaKnown RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 SPARTQ8N0X7 666 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 SIPA1Q96FS4 1042 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 CCDC90BQ9GZT6 254 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 NAA50Q9GZZ1 169 aaKnown RBP13.33□□□□□ -0.28
NXF1-201ENST00000294172 NT5DC2Q9H857 520 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 TIMMDC1Q9NPL8 285 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 CD93Q9NPY3 652 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 CLDND1Q9NY35 253 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 ICKQ9UPZ9 632 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 SH3GLB1Q9Y371 365 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 PCDHGB3Q9Y5G1 929 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 SNX11Q9Y5W9 270 aa13.33□□□□□ -0.28
NXF1-201ENST00000294172 TNFRSF11BO00300 401 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 CPNE6O95741 557 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 TTKP33981 857 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 SSR2P43308 183 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 EEF1A2Q05639 463 aaKnown RBP13.32□□□□□ -0.28
NXF1-201ENST00000294172 RPE65Q16518 533 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 OR4C11Q6IEV9 310 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 MTSS1LQ765P7 747 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 TMEM145Q8NBT3 493 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 SETD9Q8NE22 299 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 OR2L8Q8NGY9 312 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 OR5P2Q8WZ92 322 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 TEFMQ96QE5 360 aaKnown RBP13.32□□□□□ -0.28
NXF1-201ENST00000294172 EPYCQ99645 322 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 PITHD1Q9GZP4 211 aaPredicted RBP13.32□□□□□ -0.28
NXF1-201ENST00000294172 KLHL31Q9H511 634 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 ANGPT4Q9Y264 503 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 KLHL20Q9Y2M5 609 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 AP1M2Q9Y6Q5 423 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 MYO10Q9HD67 2058 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 TICRRQ7Z2Z1 1910 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 PRUNE2Q8WUY3 3088 aa13.32□□□□□ -0.28
NXF1-201ENST00000294172 WASHC1A8K0Z3 465 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 H0Y8X5 98 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 ANGPTL1O95841 491 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 HTR1AP08908 422 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 FMO3P31513 532 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 GRK3P35626 688 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 BCL6P41182 706 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 RPS6KA3P51812 740 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 SPIBQ01892 262 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 TOP3AQ13472 1001 aaPredicted RBP13.31□□□□□ -0.28
NXF1-201ENST00000294172 XAF1Q6GPH4 301 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 WASH2PQ6VEQ5 465 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 SZRD1Q7Z422 152 aa13.31□□□□□ -0.28
NXF1-201ENST00000294172 CREB3L4Q8TEY5 395 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms