RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ETAA1Q9NY74 926 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 HTR3EA5X5Y0 456 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 C5AR1P21730 350 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 CD70P32970 193 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SLC36A4Q6YBV0 504 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 TMEM234Q8WY98 164 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 CSTAP01040 98 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SLC2A2P11168 524 aaPredicted RBP16.63■□□□□ 0.25
SHANK1-201ENST00000293441 CYBAP13498 195 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 CD1DP15813 335 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SLC6A4P31645 630 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 PLP2Q04941 152 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 CBLBQ13191 982 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 FAM69BQ5VUD6 431 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 PSAPL1Q6NUJ1 521 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 OR6N2Q8NGY6 317 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SMAD9O15198 467 aaKnown RBP16.63■□□□□ 0.25
SHANK1-201ENST00000293441 EDNRBP24530 442 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 UMODL1-AS1Q8N2C9 162 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF382Q96SR6 550 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SLC2A11Q9BYW1 496 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 EIF3KQ9UBQ5 218 aaKnown RBP16.63■□□□□ 0.25
SHANK1-201ENST00000293441 TMEM5Q9Y2B1 443 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 PCDHGB2Q9Y5G2 931 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 LATO43561 262 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SEMA4FO95754 770 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 CRTC1Q6UUV9 634 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF761Q86XN6 746 aaPredicted RBP16.63■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF565Q8N9K5 539 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 DMRTB1Q96MA1 342 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 SUSD2Q9UGT4 822 aa16.63■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF487B1APH4 448 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 RPS15AP62244 130 aaKnown RBP16.62■□□□□ 0.25
SHANK1-201ENST00000293441 SGCAQ16586 387 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 GALNT10Q86SR1 603 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 WDTC1Q8N5D0 677 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF283Q8N7M2 679 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 ZDHHC1Q8WTX9 485 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 CPNE2Q96FN4 548 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-201ENST00000293441 ITPAQ9BY32 194 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 TTYH1Q9H313 450 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-201ENST00000293441 MEAF6Q9HAF1 191 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 PARPBPQ9NWS1 579 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 GLS2Q9UI32 602 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 IFT52Q9Y366 437 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 MAD2L1BPQ15013 274 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-201ENST00000293441 FOXRED2Q8IWF2 684 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 TMEM40Q8WWA1 233 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 OR5P2Q8WZ92 322 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 BORCS8Q96FH0 119 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 PLOD2O00469 737 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 OTX2P32243 289 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 GXYLT1Q4G148 440 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 RAET1LQ5VY80 246 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 NLGN4XQ8N0W4 816 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 F2RL3Q96RI0 385 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 EURLQ9NYK6 297 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF69Q9UC07 566 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 MEIS3P2A8K0S8 358 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 HSPA12AO43301 675 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 SLC10A2Q12908 348 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-201ENST00000293441 NCEH1Q6PIU2 408 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 LRRC15Q8TF66 581 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 TMCO6Q96DC7 493 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 TM9SF3Q9HD45 589 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 OAZ2O95190 189 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 FPR1P21462 350 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 RBMS1P29558 406 aaKnown RBP16.62■□□□□ 0.25
SHANK1-201ENST00000293441 RAB39AQ14964 217 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 SNX29P2Q8IUI4 249 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 OR4C15Q8NGM1 316 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 SLC22A8Q8TCC7 542 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 CCDC107Q8WV48 283 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 TMEM80Q96HE8 168 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 TRPV4Q9HBA0 871 aa16.62■□□□□ 0.25
SHANK1-201ENST00000293441 FARS2O95363 451 aaKnown RBP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 LRIT3Q3SXY7 679 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 CEP76Q8TAP6 659 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF821O75541 412 aaPredicted RBP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 LEPRP48357 1165 aaKnown RBP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 ENTPD1P49961 510 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 RAB28P51157 221 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 CARM1Q86X55 608 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 TTC9BQ8N6N2 239 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 DAZLQ92904 295 aaKnown RBP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF689Q96CS4 500 aaPredicted RBP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 FARSAQ9Y285 508 aaKnown RBP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 SMIM30A4D0T7 59 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 METTL21EPA6NDL7 271 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 CTSAP10619 480 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 CASP6P55212 293 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 CDKN2DP55273 166 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 HNRNPKP61978 463 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHANK1-201ENST00000293441 UBQLNLQ8IYU4 475 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 OR5T2Q8NGG2 359 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 EPCAMP16422 314 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 HRH2P25021 359 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 HHEXQ03014 270 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 TCEANCQ8N8B7 351 aa16.61■□□□□ 0.25
SHANK1-201ENST00000293441 BBS10Q8TAM1 723 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms