RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PPM1BO75688 479 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 OR12D2P58182 307 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 PPP1R8Q12972 351 aaKnown RBP12.3□□□□□ -0.44
PTCD1-201ENST00000292478 DOC2AQ14183 400 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 GK3PQ14409 553 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 CARTPTQ16568 116 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF423Q2M1K9 1284 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 RTP2Q5QGT7 225 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF627Q7L945 461 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 ADAMTS18Q8TE60 1221 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 MUS81Q96NY9 551 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 SCAMP2O15127 329 aaKnown RBP12.29□□□□□ -0.44
PTCD1-201ENST00000292478 APBB3O95704 486 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ARSDP51689 593 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 WNT7BP56706 349 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ACTC1P68032 377 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ACTA1P68133 377 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 GINS1Q14691 196 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 SEC23BQ15437 767 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 TBC1D25Q3MII6 688 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 SLC27A4Q6P1M0 643 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 GALNTL5Q7Z4T8 443 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 KRTCAP2Q8N6L1 136 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 FANK1Q8TC84 345 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ZDHHC12Q96GR4 267 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF451Q9Y4E5 1061 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 DNAJC15Q9Y5T4 150 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 WASHC1A8K0Z3 465 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 WASH3PC4AMC7 463 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 G3V2L1 256 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 B4GALT2O60909 372 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ASGR2P07307 311 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 YES1P07947 543 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 GGT1P19440 569 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 CD68P34810 354 aaPredicted RBP12.29□□□□□ -0.44
PTCD1-201ENST00000292478 RPA4Q13156 261 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 C17orf99Q6UX52 265 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 WASH2PQ6VEQ5 465 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ISOC1Q96CN7 298 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 SCRN2Q96FV2 425 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 SLC12A9Q9BXP2 914 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 TMA7Q9Y2S6 64 aaKnown RBP12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF432O94892 652 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ATF6P18850 670 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 DHPSP49366 369 aaPredicted RBP12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF782Q6ZMW2 699 aaPredicted RBP12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF675Q8TD23 568 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 SMARCD2Q92925 531 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 FUBP1Q96AE4 644 aaKnown RBP12.29□□□□□ -0.44
PTCD1-201ENST00000292478 PAAF1Q9BRP4 392 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 PRTFDC1Q9NRG1 225 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 TBCCD1Q9NVR7 557 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 SLC3A1Q07837 685 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 PIGGQ5H8A4 983 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF517Q6ZMY9 492 aaPredicted RBP12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ASRGL1Q7L266 308 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 NUP43Q8NFH3 380 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 NKD1Q969G9 470 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 FBXL8Q96CD0 374 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 MNTQ99583 582 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 HRASLS2Q9NWW9 162 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 RNF186Q9NXI6 227 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 KLRF1Q9NZS2 232 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 ADAMTS6Q9UKP5 1117 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 EPCAMP16422 314 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 BPIP17213 487 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 MC1RQ01726 317 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 GRM2Q14416 872 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 DHCR24Q15392 516 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 KIAA0319Q5VV43 1072 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 UTS2BQ765I0 119 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 OR8J1Q8NGP2 316 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 TMEM40Q8WWA1 233 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 TMEM234Q8WY98 164 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 TMEM203Q969S6 136 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 PELI2Q9HAT8 420 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 PCDHB16Q9NRJ7 776 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 CENPMQ9NSP4 180 aa12.29□□□□□ -0.44
PTCD1-201ENST00000292478 MYH1P12882 1939 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 CPED1A4D0V7 1026 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 SOX14O95416 240 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 HLCSP50747 726 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 PLEKHG7Q6ZR37 379 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 AMIGO1Q86WK6 493 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 ARMC10Q8N2F6 343 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 RNF121Q9H920 327 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 DNAJC27Q9NZQ0 273 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 PCDHB14Q9Y5E9 798 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 ADAMTSL3P82987 1691 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 SOBPA7XYQ1 873 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 SLITRK5O94991 958 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 SNAP29O95721 258 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 OR12D1P0DN82 309 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 POLR2CP19387 275 aaPredicted RBP12.28□□□□□ -0.44
PTCD1-201ENST00000292478 ITGA3P26006 1051 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 CD47Q08722 323 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 POU4F2Q12837 409 aa12.28□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF234Q14588 700 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms