RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DPM1O60762 260 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 ELK4P28324 431 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 ACSM2AQ08AH3 577 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 EIF2B5Q13144 721 aaKnown RBP16.03■□□□□ 0.16
CPSF4-201ENST00000292476 GPR107Q5VW38 600 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 ACSM2BQ68CK6 577 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 SPESP1Q6UW49 350 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 GPR155Q7Z3F1 870 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 FAM129CQ86XR2 697 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 RBM12BQ8IXT5 1001 aaKnown RBP16.03■□□□□ 0.16
CPSF4-201ENST00000292476 FRMD1Q8N878 549 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 CHDHQ8NE62 594 aaPredicted RBP16.03■□□□□ 0.16
CPSF4-201ENST00000292476 TTLQ8NG68 377 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 HUS1BQ8NHY5 278 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 NETO1Q8TDF5 533 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 RAB2BQ8WUD1 216 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 LCN9Q8WX39 176 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 SLC6A18Q96N87 628 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 TSSK3Q96PN8 268 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 MTERF1Q99551 399 aaKnown RBP16.03■□□□□ 0.16
CPSF4-201ENST00000292476 AMBRA1Q9C0C7 1298 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 LIN28AQ9H9Z2 209 aaKnown RBP16.03■□□□□ 0.16
CPSF4-201ENST00000292476 SLC6A13Q9NSD5 602 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 POT1Q9NUX5 634 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 RPS6KA6Q9UK32 745 aa16.03■□□□□ 0.16
CPSF4-201ENST00000292476 A6NCN8 305 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 ATE1O95260 518 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 CCDC159P0C7I6 412 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 GPX2P18283 190 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 PPIBP23284 216 aaKnown RBP16.02■□□□□ 0.16
CPSF4-201ENST00000292476 EEF1B2P24534 225 aaKnown RBP16.02■□□□□ 0.16
CPSF4-201ENST00000292476 PTX3P26022 381 aaPredicted RBP16.02■□□□□ 0.16
CPSF4-201ENST00000292476 GRK3P35626 688 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 TPD52P55327 224 aaPredicted RBP16.02■□□□□ 0.16
CPSF4-201ENST00000292476 RAB15P59190 212 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 VAC14Q08AM6 782 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 LRRC74AQ0VAA2 488 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 KCNAB2Q13303 367 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 DDX39BQ13838 428 aaKnown RBP16.02■□□□□ 0.16
CPSF4-201ENST00000292476 SIM2Q14190 667 aaPredicted RBP16.02■□□□□ 0.16
CPSF4-201ENST00000292476 PGS1Q32NB8 556 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 WDR45BQ5MNZ6 344 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 ZNF691Q5VV52 312 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 CPZQ66K79 652 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 CEP68Q76N32 757 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 AMIGO1Q86WK6 493 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 NRROSQ86YC3 692 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 SDR16C5Q8N3Y7 309 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 ARL10Q8N8L6 244 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 DRAXINQ8NBI3 349 aaPredicted RBP16.02■□□□□ 0.16
CPSF4-201ENST00000292476 SETD9Q8NE22 299 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 OR4K1Q8NGD4 311 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 PPP1R14BQ96C90 147 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 APIPQ96GX9 242 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 INPP5KQ9BT40 448 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 GPN2Q9H9Y4 310 aaPredicted RBP16.02■□□□□ 0.16
CPSF4-201ENST00000292476 SMURF2Q9HAU4 748 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 TM9SF3Q9HD45 589 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 AHSPQ9NZD4 102 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 SCHIP1Q9P0W5 487 aaPredicted RBP16.02■□□□□ 0.16
CPSF4-201ENST00000292476 ICKQ9UPZ9 632 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 CORO2BQ9UQ03 480 aa16.02■□□□□ 0.16
CPSF4-201ENST00000292476 LOC100130705A0A1B0GUX0 176 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 A0A1W2PPV9 198 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 FAM221BA6H8Z2 402 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 ANKDD1BA6NHY2 528 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 MAGEB17A8MXT2 336 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 GFRA3O60609 400 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 UGT2B11O75310 529 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 E2F6O75461 281 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 EPN2O95208 641 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 VIPP01282 170 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 TACR1P25103 407 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 CMPK1P30085 196 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 ASMTP46597 345 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 ELOCQ15369 112 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 NEDD8Q15843 81 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 XAF1Q6GPH4 301 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 TMEM26Q6ZUK4 368 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 R3HCC1LQ7Z5L2 792 aaKnown RBP16.02■□□□□ 0.15
CPSF4-201ENST00000292476 CAMKMTQ7Z624 323 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 TAF8Q7Z7C8 310 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 C11orf74Q86VG3 221 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 LINC01555Q8NAE3 123 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 SUMF1Q8NBK3 374 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 APOLD1Q96LR9 279 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 BCL7BQ9BQE9 202 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 ACAT2Q9BWD1 397 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 DUSP15Q9H1R2 295 aaPredicted RBP16.02■□□□□ 0.15
CPSF4-201ENST00000292476 RHBGQ9H310 441 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 IL1RAPQ9NPH3 570 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 SIRT5Q9NXA8 310 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 TAAR2Q9P1P5 351 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 APOBEC3BQ9UH17 382 aaKnown RBP16.02■□□□□ 0.15
CPSF4-201ENST00000292476 PCDHGA8Q9Y5G5 932 aa16.02■□□□□ 0.15
CPSF4-201ENST00000292476 MAGED1Q9Y5V3 778 aaPredicted RBP16.02■□□□□ 0.15
CPSF4-201ENST00000292476 ZFHX2Q9C0A1 2572 aaPredicted RBP16.01■□□□□ 0.15
CPSF4-201ENST00000292476 TLR4O00206 839 aa16.01■□□□□ 0.15
CPSF4-201ENST00000292476 SCAMP1O15126 338 aa16.01■□□□□ 0.15
CPSF4-201ENST00000292476 CSF2P04141 144 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms