RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 DCAF10Q5QP82 559 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 MFSD4BQ5TF39 518 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 PCSK4Q6UW60 755 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 METTL21AQ8WXB1 218 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 SORBS1Q9BX66 1292 aaKnown RBP25.32■■□□□ 1.64
SSU72-201ENST00000291386 ING2Q9H160 280 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 MS4A12Q9NXJ0 267 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 VPS29Q9UBQ0 182 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 SLC12A4Q9UP95 1085 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 MRPS33Q9Y291 106 aaKnown RBP25.32■■□□□ 1.64
SSU72-201ENST00000291386 MED13Q9UHV7 2174 aa25.32■■□□□ 1.64
SSU72-201ENST00000291386 BLACEA4D250 179 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 CDC123O75794 336 aaPredicted RBP25.31■■□□□ 1.64
SSU72-201ENST00000291386 TBL3Q12788 808 aaKnown RBP25.31■■□□□ 1.64
SSU72-201ENST00000291386 SLAMF1Q13291 335 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 ABRAXAS2Q15018 415 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 ARL13AQ5H913 290 aaPredicted RBP25.31■■□□□ 1.64
SSU72-201ENST00000291386 MRM1Q6IN84 353 aaKnown RBP25.31■■□□□ 1.64
SSU72-201ENST00000291386 RNF165Q6ZSG1 346 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 ZCCHC23Q6ZST2 131 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 ZNF595Q8IYB9 648 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 ATP6V1G3Q96LB4 118 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 MAPKAP1Q9BPZ7 522 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 ADNPQ9H2P0 1102 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 PRDM9Q9NQV7 894 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 C19orf25Q9UFG5 118 aaPredicted RBP25.31■■□□□ 1.64
SSU72-201ENST00000291386 FBXL4Q9UKA2 621 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 SPACA6W5XKT8 324 aa25.31■■□□□ 1.64
SSU72-201ENST00000291386 OR2W5A6NFC9 320 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 FAM227AF5H4B4 570 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 AZIN1O14977 448 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 B4GALT2O60909 372 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 EEDO75530 441 aaKnown RBP25.3■■□□□ 1.64
SSU72-201ENST00000291386 HPP00738 406 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 COX6A1P12074 109 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 POLE2P56282 527 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 HSD17B7P56937 341 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 SOX8P57073 446 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 CPZQ66K79 652 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 NDUFAF7Q7L592 441 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 PAGE2Q7Z2X7 111 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 SCUBE1Q8IWY4 988 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 C8orf44Q96CB5 159 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 CSF3RQ99062 836 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 MESP1Q9BRJ9 268 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 ARHGAP9Q9BRR9 750 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 MRPL1Q9BYD6 325 aaKnown RBP25.3■■□□□ 1.64
SSU72-201ENST00000291386 ACPTQ9BZG2 426 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 LYARQ9NX58 379 aaKnown RBP25.3■■□□□ 1.64
SSU72-201ENST00000291386 TUBD1Q9UJT1 453 aa25.3■■□□□ 1.64
SSU72-201ENST00000291386 IGKV3D-11A0A0A0MRZ8 115 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 IGHV1-45A0A0A0MS14 117 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 CLDN4O14493 209 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 ATXN7O15265 892 aaPredicted RBP25.29■■□□□ 1.64
SSU72-201ENST00000291386 PRMT3O60678 531 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 CRCPO75575 148 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 SERPINE1P05121 402 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 CHRNGP07510 517 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 ARRB2P32121 409 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 FAAH2Q6GMR7 532 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 TRIM46Q7Z4K8 759 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 ANKRD37Q7Z713 158 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 CHTF18Q8WVB6 975 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 PTCHD1Q96NR3 888 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 HBEGFQ99075 208 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 TRIM55Q9BYV6 548 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 SHCBP1LQ9BZQ2 653 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 ZNF700Q9H0M5 742 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 PHF11Q9UIL8 331 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 ASB4Q9Y574 426 aa25.29■■□□□ 1.64
SSU72-201ENST00000291386 WDR91A4D1P6 747 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 SYNDIG1LA6NDD5 238 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 TMEM114B3SHH9 223 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 CEACAM4O75871 244 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 SASH3O75995 380 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 SNUPNO95149 360 aaKnown RBP25.28■■□□□ 1.64
SSU72-201ENST00000291386 TPP2P29144 1249 aaPredicted RBP25.28■■□□□ 1.64
SSU72-201ENST00000291386 WDR4P57081 412 aaKnown RBP25.28■■□□□ 1.64
SSU72-201ENST00000291386 BTG2P78543 158 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 PCOLCEQ15113 449 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 NSDHLQ15738 373 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 TTMPQ5BVD1 217 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 KANK2Q63ZY3 851 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 ATG14Q6ZNE5 492 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 CPEB2Q7Z5Q1 589 aaKnown RBP25.28■■□□□ 1.64
SSU72-201ENST00000291386 GPR180Q86V85 440 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 CLYBLQ8N0X4 340 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 ANKRD42Q8N9B4 389 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 FAM47BQ8NA70 645 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 TMEM52Q8NDY8 209 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 PPP1R14CQ8TAE6 165 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 TSLPQ969D9 159 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 ATP13A2Q9NQ11 1180 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 PRTFDC1Q9NRG1 225 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 SIRT5Q9NXA8 310 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 FBXW2Q9UKT8 454 aa25.28■■□□□ 1.64
SSU72-201ENST00000291386 NBEAQ8NFP9 2946 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 TCRBV16S1A1N1A0A5B0 115 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 TMPRSS11DO60235 418 aa25.27■■□□□ 1.64
SSU72-201ENST00000291386 CHN1P15882 459 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms