RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ULK3Q6PHR2 472 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 ARMC10Q8N2F6 343 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 OR10G6Q8NH81 332 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 PIGKQ92643 395 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 ELAC1Q9H777 363 aaKnown RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 NDUFAF4Q9P032 175 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 RPL17P18621 184 aaKnown RBP16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 DIO3P55073 304 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 GPR17Q13304 367 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 NKAPLQ5M9Q1 402 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 LIPJQ5W064 366 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 TMCO2Q7Z6W1 182 aaPredicted RBP16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 CDK15Q96Q40 435 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 ZNF350Q9GZX5 532 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 CHRNB1P11230 501 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 UQCRC2P22695 453 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 CRHBPP24387 322 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 GADD45AP24522 165 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 CPOXP36551 454 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 OR4D2P58180 307 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 GHRHRQ02643 423 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC10A2Q12908 348 aaPredicted RBP16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 APOFQ13790 326 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 LRP8Q14114 963 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 GAS6Q14393 721 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 NAPRTQ6XQN6 538 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 IFNLR1Q8IU57 520 aaPredicted RBP16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 AVL9Q8NBF6 648 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 OR13F1Q8NGS4 319 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 FBXO27Q8NI29 283 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 ERVK13-1Q9NX77 482 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 TTC24A2A3L6 582 aaPredicted RBP16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 CDC7O00311 574 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 FSHRP23945 695 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 PKLRP30613 574 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 MPIP34949 423 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC30A6Q6NXT4 461 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 FAM124AQ86V42 546 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 PIM3Q86V86 326 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC7A5P1Q8MH63 180 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 HDDC3Q8N4P3 179 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 OR5J2Q8NH18 312 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 ZFP90Q8TF47 636 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 IQCF5A8MTL0 148 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 M0R036 132 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 EDIL3O43854 480 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 CA5AP35218 305 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 ACVRL1P37023 503 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 CASP3P42574 277 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 CDKL4Q5MAI5 379 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 GPRC6AQ5T6X5 926 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 HS3ST5Q8IZT8 346 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 TCEANCQ8N8B7 351 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 NDNFQ8TB73 568 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 ZNF436Q9C0F3 470 aaPredicted RBP16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 PLEKHA6Q9Y2H5 1048 aa16.87■□□□□ 0.29
PCDHA13-201ENST00000289272 ARNTLO00327 626 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 PDGFRLQ15198 375 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 SF1Q15637 639 aaKnown RBP16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 GRK1Q15835 563 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 USF2Q15853 346 aaPredicted RBP16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 MAMDC4Q6UXC1 1216 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 CELF5Q8N6W0 485 aaKnown RBP16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 SAMD12Q8N8I0 201 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 TMEM125Q96AQ2 219 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 POTEKPQ9BYX7 375 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 TRAV6A0A075B6T7 132 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 RASGRP1O95267 797 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 GIMD1P0DJR0 217 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 FDXRP22570 491 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC27A4Q6P1M0 643 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 SH3RF2Q8TEC5 729 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 GPER1Q99527 375 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 KXD1Q9BQD3 176 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 TMEM248Q9NWD8 314 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 ZNF14P17017 642 aaPredicted RBP16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 LHCGRP22888 699 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 EIF2S3P41091 472 aaKnown RBP16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 MAP3K8P41279 467 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 METTL11BQ5VVY1 283 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 MS4A15Q8N5U1 240 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 SCLYQ96I15 445 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 ZNF471Q9BX82 626 aaPredicted RBP16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 NIPAL2Q9H841 368 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 ELL3Q9HB65 397 aaPredicted RBP16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 DNAJC27Q9NZQ0 273 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 CD84Q9UIB8 345 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 PCDHB11Q9Y5F2 797 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 MEIOCA2RUB1 952 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 LOC730098B7Z3J9 87 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 CDC40O60508 579 aaKnown RBP eCLIP16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 JRKO75564 520 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 NR4A2P43354 598 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 CLDN8P56748 225 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 SCAPQ12770 1279 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 MADCAM1Q13477 382 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 OR8K5Q8NH50 307 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 ADAMTS19Q8TE59 1207 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 RIT1Q92963 219 aa16.86■□□□□ 0.29
PCDHA13-201ENST00000289272 FKBP10Q96AY3 582 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms