RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 C11orf24Q96F05 449 aaPredicted RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 RBM18Q96H35 190 aaKnown RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 QRFPRQ96P65 431 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 BCL2L14Q9BZR8 327 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SPNS1Q9H2V7 528 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 NOP53Q9NZM5 478 aaKnown RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 VPS29Q9UBQ0 182 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 TIMM22Q9Y584 194 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 H7BY64 318 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 CAPN5O15484 640 aaPredicted RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 PEX11AO75192 247 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 DNAJC8O75937 253 aaPredicted RBP8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 GSNP06396 782 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 PRPS2P11908 318 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 NTSP30990 170 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 ACADVLP49748 655 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 HTR6P50406 440 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SPEM2Q0P670 501 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 CARTPTQ16568 116 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SGCBQ16585 318 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 C16orf62Q7Z3J2 963 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 ASPGQ86U10 573 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 CHTF18Q8WVB6 975 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 PRAP1Q96NZ9 151 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 NDEL1Q9GZM8 345 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 AKTIPQ9H8T0 292 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 LRTM1Q9HBL6 345 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 PARD6AQ9NPB6 346 aa8.03□□□□□ -1.12
PTPDC1-201ENST00000288976 SCELO95171 688 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 CPNE6O95741 557 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 PLGP00747 810 aaPredicted RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 LINC00032P0C843 101 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 NT5EP21589 574 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 CSF2RBP32927 897 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 LSSP48449 732 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 HNRNPFP52597 415 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 AP2B1P63010 937 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 MRPS15P82914 257 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 MED21Q13503 144 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 SF3A2Q15428 464 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 CYP27C1Q4G0S4 372 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 TCTE1Q5JU00 501 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 GARNL3Q5VVW2 1013 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 TYW3Q6IPR3 259 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 Q6ZSR9 355 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 IKBIPQ70UQ0 350 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 MICU2Q8IYU8 434 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 METTL4Q8N3J2 472 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 GAL3ST3Q96A11 431 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 OR2A5Q96R48 311 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 TUBB6Q9BUF5 446 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 PLCL2Q9UPR0 1127 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 RUVBL1Q9Y265 456 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 DYTNA2CJ06 578 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 FAM227AF5H4B4 570 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 DKK1O94907 266 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 HIST1H2ABP04908 130 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 RPLP0P05388 317 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 MLLT3P42568 568 aaPredicted RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 HSD11B2P80365 405 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 STX5Q13190 355 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 GPAT3Q53EU6 434 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 BTN2A1Q7KYR7 527 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 HIST3H2AQ7L7L0 130 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 PAGE2Q7Z2X7 111 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 HIST1H2ACQ93077 130 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 NRTNQ99748 197 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 EBF4Q9BQW3 602 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 ADI1Q9BV57 179 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 ARMC7Q9H6L4 198 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 AIG1Q9NVV5 245 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 ZIM2Q9NZV7 527 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 RBM7Q9Y580 266 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 BLACEA4D250 179 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 NDUFS4O43181 175 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 OR1F1O43749 312 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 GUCY1B2O75343 617 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 SLC35G6P0C7Q6 338 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF24P17028 368 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 ATP6V1B2P21281 511 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 RPL4P36578 427 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 CLK3P49761 638 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 ABHD13Q7L211 337 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 ARHGAP22Q7Z5H3 698 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 OR5M3Q8NGP4 307 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF563Q8TA94 476 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 TSPEARQ8WU66 669 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 SLC9A6Q92581 669 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 C3orf30Q96M34 536 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 SMOC1Q9H4F8 434 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 MAT2BQ9NZL9 334 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 BTBD3Q9Y2F9 522 aa8.02□□□□□ -1.13
PTPDC1-201ENST00000288976 D6RAR5 112 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 UBDO15205 165 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 RFPL3O75679 317 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 JUNP05412 331 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 CRATP43155 626 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NEK2P51955 445 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 KIAA0040Q15053 153 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms