RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SP140Q13342 867 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 ZNF385BQ569K4 471 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 C2orf27AQ580R0 203 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 ENTHD1Q8IYW4 607 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 OXR1Q8N573 874 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 DIRAS2Q96HU8 199 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 PPP1R16AQ96I34 528 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 MAGEB10Q96LZ2 347 aaPredicted RBP15.21■□□□□ 0.03
SMAD6-201ENST00000288840 SAMD11Q96NU1 681 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 TEX12Q9BXU0 123 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 COMMD3Q9UBI1 195 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 SSR3Q9UNL2 185 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 GPR52Q9Y2T5 361 aa15.21■□□□□ 0.03
SMAD6-201ENST00000288840 GRXCR2A6NFK2 248 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 M0R3H8 397 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 ERI3O43414 337 aaKnown RBP15.21■□□□□ 0.02
SMAD6-201ENST00000288840 CLTBP09497 229 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 C6P13671 934 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 IDSP22304 550 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 CCT3P49368 545 aaKnown RBP15.21■□□□□ 0.02
SMAD6-201ENST00000288840 PNLIPRP1P54315 467 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 RAB25P57735 213 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 GABARAPL2P60520 117 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 PROX2Q3B8N5 592 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 KLHL17Q6TDP4 642 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 OR14C36Q8NHC7 312 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 ADAMTS19Q8TE59 1207 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 PRR14Q9BWN1 585 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 TM7SF3Q9NS93 570 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 SLC9A8Q9Y2E8 581 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 CCL27Q9Y4X3 112 aa15.21■□□□□ 0.02
SMAD6-201ENST00000288840 NYNRINQ9P2P1 1898 aaKnown RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 GSAPA4D1B5 854 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 YY2O15391 372 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 ADH1CP00326 375 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 HTR1AP08908 422 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 NKX3-2P78367 333 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 HOXC5Q00444 222 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 C5orf22Q49AR2 442 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 KIAA1161Q6NSJ0 714 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 USP43Q70EL4 1123 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 ANKRD13BQ86YJ7 626 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 GPN2Q9H9Y4 310 aaPredicted RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3DA0A087WVF3 549 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3IA0A087WXS9 549 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3EA0A087X179 549 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3KA0A087X1G2 549 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3FA6NER0 549 aaPredicted RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3LB9A6J9 549 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 WWP2O00308 870 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 CTDSP2O14595 271 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 PRKRAO75569 313 aaKnown RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 PTHP01270 115 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3HP0C7X1 549 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 PORP16435 677 aaPredicted RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 ZNF8P17098 575 aaPredicted RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 RPL3P39023 403 aaKnown RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 ID2Q02363 134 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 GPNMBQ14956 572 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 PTGES3Q15185 160 aaKnown RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 DHCR24Q15392 516 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3GQ6DHY5 549 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3CQ6IPX1 549 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 GRHL2Q6ISB3 625 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 PRSS48Q7RTY5 328 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TBC1D3Q8IZP1 549 aaPredicted RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 GHDCQ8N2G8 530 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 B3GNT7Q8NFL0 401 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 TMEM19Q96HH6 336 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 OR4K3Q96R72 315 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 ZNF300Q96RE9 604 aaPredicted RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 ABCG4Q9H172 646 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 RETREG1Q9H6L5 497 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 PRAMEF33A0A0G2JMD5 474 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 PRAMEF10O60809 474 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 CPNE6O95741 557 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 RYKP34925 604 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 ZNF57Q68EA5 555 aaPredicted RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 REEP3Q6NUK4 255 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 ZNF730Q6ZMV8 503 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 SPATC1Q76KD6 591 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 PTOV1Q86YD1 416 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 L3MBTL4Q8NA19 623 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 CENPOQ9BU64 300 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 CUEDC1Q9NWM3 386 aaPredicted RBP15.2■□□□□ 0.02
SMAD6-201ENST00000288840 SPATA7Q9P0W8 599 aa15.2■□□□□ 0.02
SMAD6-201ENST00000288840 ANHXE9PGG2 379 aa15.19■□□□□ 0.02
SMAD6-201ENST00000288840 H1F0P07305 194 aaKnown RBP15.19■□□□□ 0.02
SMAD6-201ENST00000288840 SLC6A11P48066 632 aa15.19■□□□□ 0.02
SMAD6-201ENST00000288840 OLR1P78380 273 aa15.19■□□□□ 0.02
SMAD6-201ENST00000288840 LSRQ86X29 649 aaPredicted RBP15.19■□□□□ 0.02
SMAD6-201ENST00000288840 GGHQ92820 318 aa15.19■□□□□ 0.02
SMAD6-201ENST00000288840 ZSWIM3Q96MP5 696 aa15.19■□□□□ 0.02
SMAD6-201ENST00000288840 OR5M11Q96RB7 305 aa15.19■□□□□ 0.02
SMAD6-201ENST00000288840 HS3ST2Q9Y278 367 aa15.19■□□□□ 0.02
SMAD6-201ENST00000288840 PTX3P26022 381 aaPredicted RBP15.19■□□□□ 0.02
SMAD6-201ENST00000288840 DUSP7Q16829 419 aa15.19■□□□□ 0.02
SMAD6-201ENST00000288840 CRTC2Q53ET0 693 aaPredicted RBP15.19■□□□□ 0.02
SMAD6-201ENST00000288840 TMPRSS11AQ6ZMR5 421 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms