RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CPAMD8Q8IZJ3 1885 aa8.61□□□□□ -1.03
HMGN1-201ENST00000288344 USP9XQ93008 2570 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 TCRBV16S1A1N1A0A5B0 115 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 ANKDD1BA6NHY2 528 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 MKRN2OSH3BPM6 223 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 PLPP1O14494 284 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 UBFD1O14562 309 aaKnown RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 PLIN3O60664 434 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 CDH16O75309 829 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 SORBS2O94875 1100 aaKnown RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 CLDN9O95484 217 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 TGFB1P01137 390 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 CELA2AP08217 269 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 GFAPP14136 432 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 CREB1P16220 341 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 ATP5F1P24539 256 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 SLCO1A2P46721 670 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 CDH13P55290 713 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 LIM2P55344 173 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 STXBP1P61764 594 aaKnown RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 BTN3A2P78410 334 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 C19orf57Q0VDD7 668 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 CUL3Q13618 768 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 ZRSR2Q15696 482 aaKnown RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 TMEM35AQ53FP2 167 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 LACTB2Q53H82 288 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 PAGE2BQ5JRK9 111 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 KHDRBS2Q5VWX1 349 aaKnown RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 PLAG1Q6DJT9 500 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 ABHD13Q7L211 337 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 CPEB2Q7Z5Q1 589 aaKnown RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 PRSS58Q8IYP2 241 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 TBC1D19Q8N5T2 526 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 SNX31Q8N9S9 440 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 OR4F6Q8NGB9 312 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 UBLCP1Q8WVY7 318 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 UBE2E3Q969T4 207 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 TMEM237Q96Q45 408 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 LMF1Q96S06 567 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 SERINC2Q96SA4 455 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 CCDC77Q9BR77 488 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 SLC25A23Q9BV35 468 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 OR51B5Q9H339 312 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 GSTO2Q9H4Y5 243 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 DDX31Q9H8H2 851 aaKnown RBP8.6□□□□□ -1.03
HMGN1-201ENST00000288344 TNFRSF12AQ9NP84 129 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 DMRT3Q9NQL9 472 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 NECTIN3Q9NQS3 549 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 ACSS2Q9NR19 701 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 ADGRE2Q9UHX3 823 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 ASB4Q9Y574 426 aa8.6□□□□□ -1.03
HMGN1-201ENST00000288344 A0A0A6YYD5 115 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 IGHV3-20A0A0C4DH32 117 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 A0A0G2JN53 185 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 URADA6NGE7 173 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 RTCAO00442 366 aaKnown RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 PEX12O00623 359 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ERI3O43414 337 aaKnown RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 TYROBPO43914 113 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 S100BP04271 92 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 SERPINA7P05543 415 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 HEXBP07686 556 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 PRR35P0CG20 571 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 C8orf89P0DMQ9 161 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 BMP2P12643 396 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 PLA2G2AP14555 144 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ACPPP15309 386 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 HIST1H1TP22492 207 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 PTX3P26022 381 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 SERPINB1P30740 379 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 CASRP41180 1078 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 TSFMP43897 325 aaKnown RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 PIK3CGP48736 1102 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 NEK2P51955 445 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 MTTPP55157 894 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 DNAJB13P59910 316 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 IGLV3-21P80748 117 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 CLCQ05315 142 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 TBL3Q12788 808 aaKnown RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 NFATC3Q12968 1075 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 RBBP7Q16576 425 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 PLEKHN1Q494U1 663 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 VWA5B1Q5TIE3 1220 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ZYG11AQ6WRX3 759 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 Q6ZS92 163 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ASB18Q6ZVZ8 466 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 PRICKLE2Q7Z3G6 844 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 PTRH1Q86Y79 214 aaKnown RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 HPS6Q86YV9 775 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 TREML1Q86YW5 311 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ZCCHC7Q8N3Z6 543 aaKnown RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 RIBC1Q8N443 379 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ACOT4Q8N9L9 421 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ELP5Q8TE02 316 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 TSLPQ969D9 159 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ANKRD9Q96BM1 317 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-201ENST00000288344 CMTM7Q96FZ5 175 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 TBCDQ9BTW9 1192 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 ZNF160Q9HCG1 818 aa8.59□□□□□ -1.03
HMGN1-201ENST00000288344 LYRM4Q9HD34 91 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms