RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 FAM174BQ3ZCQ3 159 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 CDCP2Q5VXM1 449 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 DEFB107AQ8IZN7 70 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 MCUR1Q96AQ8 359 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 VPS33AQ96AX1 596 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 MMADHCQ9H3L0 296 aaPredicted RBP17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 REEP4Q9H6H4 257 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 MAP10Q9P2G4 905 aa17.91■□□□□ 0.46
PDLIM3-202ENST00000284770 CCDC154A6NI56 674 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 GABRR3A8MPY1 467 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 FOXS1O43638 330 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 RPL3P39023 403 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 MC1RQ01726 317 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 SRSF11Q05519 484 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 ART3Q13508 389 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 COL9A2Q14055 689 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 TLR1Q15399 786 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 SPANXN4Q5MJ08 99 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 YOD1Q5VVQ6 348 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 C16orf89Q6UX73 402 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 HACD2Q6Y1H2 254 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 R3HCC1LQ7Z5L2 792 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 GPR180Q86V85 440 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 OR9A4Q8NGU2 314 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 MTERF3Q96E29 417 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 PRPF18Q99633 342 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 MAPKAP1Q9BPZ7 522 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 THTPAQ9BU02 230 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 NPLQ9BXD5 320 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 CUTCQ9NTM9 273 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 OCIAD1Q9NX40 245 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 TEX10Q9NXF1 929 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 KCMF1Q9P0J7 381 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 ATP6V1HQ9UI12 483 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 FBXW2Q9UKT8 454 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 ATG4BQ9Y4P1 393 aa17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-202ENST00000284770 SGK494L7N484 410 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 AGRPO00253 132 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 ANGPT2O15123 496 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 PROM1O43490 865 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 NSA2O95478 260 aaKnown RBP17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 PGRP06401 933 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 FURINP09958 794 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 COX7A2P14406 83 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 DDCP20711 480 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 DGKQP52824 942 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 ARSFP54793 590 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 LIM2P55344 173 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 PDE7AQ13946 482 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 RUNX2Q13950 521 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 TIGD2Q4W5G0 525 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 NDUFAF5Q5TEU4 345 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 C8orf82Q6P1X6 216 aaPredicted RBP17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 CYB5D1Q6P9G0 228 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 CAMKMTQ7Z624 323 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 BPHLQ86WA6 291 aaPredicted RBP17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 PGAM4Q8N0Y7 254 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 OR7A2PQ8NGA2 310 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 NDC1Q9BTX1 674 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 FAIM2Q9BWQ8 316 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 WDR41Q9HAD4 459 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 LYRM4Q9HD34 91 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 NDE1Q9NXR1 346 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 PHF11Q9UIL8 331 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 RARRES3Q9UL19 164 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 DAPP1Q9UN19 280 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 COL27A1Q8IZC6 1860 aaPredicted RBP17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 A0A0A6YYC8 382 aaPredicted RBP17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 A0A1W2PR48 441 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 ZNF860A6NHJ4 632 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 EFCAB7A8K855 629 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 H0YHG0 523 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 TMX2-CTNND1H3BSU7 103 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 I3L1I5 382 aaPredicted RBP17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 CFLARO15519 480 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 ZNF749O43361 778 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 DNAJB6O75190 326 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 PIM1P11309 404 aaPredicted RBP17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 DRD2P14416 443 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 CSRP1P21291 193 aaKnown RBP17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 S100A3P33764 101 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 PGS1Q32NB8 556 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 CPTPQ5TA50 214 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 SLCO6A1Q86UG4 719 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 MMP21Q8N119 569 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 DTWD1Q8N5C7 304 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 BMPERQ8N8U9 685 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 PCYOX1LQ8NBM8 494 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 OR8J2Q8NGG1 315 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 NETO1Q8TDF5 533 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 ROPN1LQ96C74 230 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 COQ8BQ96D53 544 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 MVB12AQ96EY5 273 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 CLPTM1LQ96KA5 538 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 CMKLR1Q99788 373 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 MS4A12Q9NXJ0 267 aa17.89■□□□□ 0.45
PDLIM3-202ENST00000284770 HYAL3O43820 417 aaPredicted RBP17.88■□□□□ 0.45
PDLIM3-202ENST00000284770 DKK1O94907 266 aa17.88■□□□□ 0.45
PDLIM3-202ENST00000284770 KIR3DL1P43629 444 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms