RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 RHOCP08134 193 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 CTRB1P17538 263 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 NUDT1P36639 197 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 RPIAP49247 311 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 MTAPQ13126 283 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 RAB33AQ14088 237 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 EFR3AQ14156 821 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 PTGES3Q15185 160 aaKnown RBP10.87□□□□□ -0.67
SCLT1-201ENST00000281142 CTRB2Q6GPI1 263 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 SDE2Q6IQ49 451 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 C19orf48Q6RUI8 117 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 PGBD3Q8N328 593 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 SKA2Q8WVK7 121 aaPredicted RBP10.87□□□□□ -0.67
SCLT1-201ENST00000281142 SNAPC3Q92966 411 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 OMA1Q96E52 524 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 MTERF1Q99551 399 aaKnown RBP10.87□□□□□ -0.67
SCLT1-201ENST00000281142 TAPBPLQ9BX59 468 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 ATG10Q9H0Y0 220 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 ZNF576Q9H609 170 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 DYRK4Q9NR20 520 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 PCDHB1Q9Y5F3 818 aa10.87□□□□□ -0.67
SCLT1-201ENST00000281142 MYO9BQ13459 2157 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 B4DXG7 233 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 K7ERQ8 282 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 SCO1O75880 301 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CYP17A1P05093 508 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 YES1P07947 543 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CD72P21854 359 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 DUSP4Q13115 394 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 LEXMQ3ZCV2 418 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 PXDC1Q5TGL8 231 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 RNF219Q5W0B1 726 aaPredicted RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 ADGRD2Q7Z7M1 963 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 OR4C15Q8NGM1 316 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 WBP2Q969T9 261 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CMTM7Q96FZ5 175 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 C8orf48Q96LL4 319 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 RIPOR3Q96MK2 946 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 DOHHQ9BU89 302 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 SLC29A3Q9BZD2 475 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 TTYH1Q9H313 450 aaPredicted RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 RETREG1Q9H6L5 497 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 ABCB9Q9NP78 766 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 IL26Q9NPH9 171 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 SLC22A14Q9Y267 594 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 TGM5O43548 720 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CLDN7O95471 211 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 SRCP12931 536 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 ETFAP13804 333 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CNR2P34972 360 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 ETV3P41162 512 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 KIR2DL3P43628 341 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 PSPHP78330 225 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 TARDBPQ13148 414 aaKnown RBP eCLIP10.86□□□□□ -0.671e-7■■■■□ 24.6
SCLT1-201ENST00000281142 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CAMKK1Q8N5S9 505 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 FLCNQ8NFG4 579 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 UBTD2Q8WUN7 234 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 FUBP3Q96I24 572 aaKnown RBP eCLIP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CHST8Q9H2A9 424 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 SLC32A1Q9H598 525 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 GKN1Q9NS71 199 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 A0A075B6Q4 140 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 PLD2O14939 933 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 ACSL4O60488 711 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 ZNF780AO75290 641 aaPredicted RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 KLKB1P03952 638 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CSF3P09919 207 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 NAT2P11245 290 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 GLULP15104 373 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 HOXB6P17509 224 aaKnown RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 MYL9P24844 172 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 OLR1P78380 273 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 POU6F2P78424 691 aaPredicted RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CSTF3Q12996 717 aaKnown RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 NFATC2Q13469 925 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 VEPH1Q14D04 833 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 SUZ12Q15022 739 aaKnown RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CHRNA6Q15825 494 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 C5orf22Q49AR2 442 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 PRPF38BQ5VTL8 546 aaKnown RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 ERICH5Q6P6B1 374 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 NCEH1Q6PIU2 408 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 FAM131AQ6UXB0 335 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 RNF130Q86XS8 419 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 FBXL6Q8N531 539 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 NLGN4YQ8NFZ3 816 aaPredicted RBP10.86□□□□□ -0.67
SCLT1-201ENST00000281142 OR4M1Q8NGD0 313 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 TMEM203Q969S6 136 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 CRELD1Q96HD1 420 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 FAM129BQ96TA1 746 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 MIXL1Q9H2W2 232 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 DNAJC27Q9NZQ0 273 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 ACSL6Q9UKU0 697 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 PCDHB11Q9Y5F2 797 aa10.86□□□□□ -0.67
SCLT1-201ENST00000281142 PRUNE2Q8WUY3 3088 aa10.85□□□□□ -0.67
SCLT1-201ENST00000281142 TRAV19A0A0A6YYK7 116 aa10.85□□□□□ -0.67
SCLT1-201ENST00000281142 SHOXO15266 292 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms