RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 OR5T2Q8NGG2 359 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 MR1Q95460 341 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 GPR174Q9BXC1 333 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 TAS2R9Q9NYW1 312 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 GSKIPQ9P0R6 139 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ACSL6Q9UKU0 697 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 NOP16Q9Y3C1 178 aaKnown RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 TRAV6A0A075B6T7 132 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 A0A1W2PQU0 124 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ZNF840PA6NDX5 716 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 CDC40O60508 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP53-201ENST00000274030 SOCS5O75159 536 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 STC2O76061 302 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 SLC35E2BP0CK96 405 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ZNF182P17025 639 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 ADH7P40394 386 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 NAA10P41227 235 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 LEPRP48357 1165 aaKnown RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 FXYD6P3P58550 94 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ARPC4P59998 168 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ADAM15Q13444 863 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 LRP8Q14114 963 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 TMEM225Q6GV28 225 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 MSANTD1Q6ZTZ1 278 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 SLC37A3Q8NCC5 494 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 OR52B6Q8NGF0 335 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 CCDC107Q8WV48 283 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 OR2M4Q96R27 311 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 C14orf105Q9NVL8 296 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 NLGN3Q9NZ94 848 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ACTL7AQ9Y615 435 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 BCKDHAP12694 445 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 ATF4P18848 351 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 HNRNPA0Q13151 305 aaKnown RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 OGFRL1Q5TC84 451 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 SLC36A4Q6YBV0 504 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 TSACCQ96A04 125 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 CMKLR1Q99788 373 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 NPLQ9BXD5 320 aaPredicted RBP11.03□□□□□ -0.64
USP53-201ENST00000274030 DUOX1Q9NRD9 1551 aa11.03□□□□□ -0.64
USP53-201ENST00000274030 TEX13DA0A0J9YY54 714 aaPredicted RBP11.02□□□□□ -0.64
USP53-201ENST00000274030 KANTRA0A1W2PQU2 76 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 METTL21EPA6NDL7 271 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 JMJD7P0C870 316 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 LHCGRP22888 699 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 SHMT2P34897 504 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 MAGEA12P43365 314 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 TBPL1P62380 186 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 PHC1P78364 1004 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 ST3GAL4Q11206 333 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 DSG2Q14126 1118 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 FBXO43Q4G163 708 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 TMEM107Q6UX40 140 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 SERINC5Q86VE9 423 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 OR2L2Q8NH16 312 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 ZNF296Q8WUU4 475 aaPredicted RBP11.02□□□□□ -0.64
USP53-201ENST00000274030 RBP7Q96R05 134 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 DPH7Q9BTV6 452 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 ST14Q9Y5Y6 855 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.02□□□□□ -0.64
USP53-201ENST00000274030 PEAK1Q9H792 1746 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 MVKQ03426 396 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 SNTA1Q13424 505 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 OCLNQ16625 522 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 CARD17Q5XLA6 110 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 ZNF517Q6ZMY9 492 aaPredicted RBP11.02□□□□□ -0.64
USP53-201ENST00000274030 LRRC20Q8TCA0 184 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 SLC2A13Q96QE2 648 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 ZNF700Q9H0M5 742 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 SARDHQ9UL12 918 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 ACSL5Q9ULC5 683 aa11.02□□□□□ -0.64
USP53-201ENST00000274030 NARSO43776 548 aaKnown RBP11.02□□□□□ -0.65
USP53-201ENST00000274030 GPR32O75388 356 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 ZNF821O75541 412 aaPredicted RBP11.02□□□□□ -0.65
USP53-201ENST00000274030 UQCRC2P22695 453 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 GRPRP30550 384 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 CCINQ13939 588 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 NUMA1Q14980 2115 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 ZNF404Q494X3 552 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 LIPKQ5VXJ0 399 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 SHQ1Q6PI26 577 aaKnown RBP11.02□□□□□ -0.65
USP53-201ENST00000274030 TSPAN33Q86UF1 283 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 LHFPL3Q86UP9 236 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 ZDHHC14Q8IZN3 488 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 LINC00471Q8N535 108 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 POGLUT1Q8NBL1 392 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 NUP43Q8NFH3 380 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.02□□□□□ -0.655e-6■■■■■ 56.5
USP53-201ENST00000274030 OSTF1Q92882 214 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 RAD9AQ99638 391 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 YTHDF1Q9BYJ9 559 aaKnown RBP11.02□□□□□ -0.65
USP53-201ENST00000274030 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.02□□□□□ -0.65
USP53-201ENST00000274030 ADAMTS10Q9H324 1103 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 DPAGT1Q9H3H5 408 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 HCN2Q9UL51 889 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 PLCL2Q9UPR0 1127 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 OR1A2Q9Y585 309 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 A0A1B0GVI7 797 aa11.02□□□□□ -0.65
USP53-201ENST00000274030 HEPACAM2A8MVW5 462 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms