RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 GASTP01350 101 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 LINC00271P0C7V0 271 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 GTF2E2P29084 291 aaKnown RBP15.88■□□□□ 0.13
VPS54-201ENST00000272322 CDKL4Q5MAI5 379 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 METTL2BQ6P1Q9 378 aaKnown RBP15.88■□□□□ 0.13
VPS54-201ENST00000272322 DSG4Q86SJ6 1040 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 IQCF1Q8N6M8 205 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 HORMAD2Q8N7B1 307 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 TERB1Q8NA31 727 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 ZNF784Q8NCA9 323 aaPredicted RBP15.88■□□□□ 0.13
VPS54-201ENST00000272322 MCFD2Q8NI22 146 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 OR8D1Q8WZ84 308 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 SUSD6Q92537 303 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 ZDHHC5Q9C0B5 715 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 DCSTAMPQ9H295 470 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 DUSP21Q9H596 190 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 DNAJC27Q9NZQ0 273 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 TAAR2Q9P1P5 351 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 AP3M1Q9Y2T2 418 aa15.88■□□□□ 0.13
VPS54-201ENST00000272322 RBMX2Q9Y388 322 aaKnown RBP15.88■□□□□ 0.13
VPS54-201ENST00000272322 FRS3O43559 492 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 CYP7B1O75881 506 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 PTHP01270 115 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 BMPR1AP36894 532 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 IL12RB1P42701 662 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 TUBA3CQ13748 450 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 C9orf64Q5T6V5 341 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 AMZ2Q86W34 360 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 ALDH16A1Q8IZ83 802 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 DNAJB8Q8NHS0 232 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 CXorf40AQ8TE69 158 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 ARMC5Q96C12 935 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 DACH2Q96NX9 599 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 PDZK1P1A8MUH7 402 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 PIN1Q13526 163 aaPredicted RBP15.87■□□□□ 0.13
VPS54-201ENST00000272322 IQCCQ4KMZ1 466 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 COL21A1Q96P44 957 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 OR5M11Q96RB7 305 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 ZNF300Q96RE9 604 aaPredicted RBP15.87■□□□□ 0.13
VPS54-201ENST00000272322 NLNQ9BYT8 704 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 C11orf49Q9H6J7 331 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 TRBV4-1A0A0J9YWV2 114 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 A8MU76 341 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 EIF3FO00303 357 aaPredicted RBP15.87■□□□□ 0.13
VPS54-201ENST00000272322 PLPP1O14494 284 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 ZSCAN9O15535 394 aaPredicted RBP15.87■□□□□ 0.13
VPS54-201ENST00000272322 TMEM31Q5JXX7 168 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 C17orf64Q86WR6 236 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 ANKRD13BQ86YJ7 626 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 ANKRD53Q8N9V6 530 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 GGHQ92820 318 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 C11orf24Q96F05 449 aaPredicted RBP15.87■□□□□ 0.13
VPS54-201ENST00000272322 MBNL1Q9NR56 388 aaKnown RBP15.87■□□□□ 0.13
VPS54-201ENST00000272322 ATAD3AQ9NVI7 634 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 KLHL42Q9P2K6 505 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 SERGEFQ9UGK8 458 aa15.87■□□□□ 0.13
VPS54-201ENST00000272322 PLXND1Q9Y4D7 1925 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 PRNPP04156 253 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 ITGAMP11215 1152 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 FAM78AQ5JUQ0 283 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 TRIM40Q6P9F5 258 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 VN1R5Q7Z5H4 357 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 FCRL4Q96PJ5 515 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 FERD3LQ96RJ6 166 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 TMEM245Q9H330 911 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 LCMT2O60294 686 aaKnown RBP15.86■□□□□ 0.13
VPS54-201ENST00000272322 PRPH2P23942 346 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 RAB8AP61006 207 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 HOXC5Q00444 222 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 DGUOKQ16854 277 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 PTCHD4Q6ZW05 846 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 CHFRQ96EP1 664 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 ALPK1Q96QP1 1244 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 KCNS3Q9BQ31 491 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 C1GALT1Q9NS00 363 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 WDR37Q9Y2I8 494 aa15.86■□□□□ 0.13
VPS54-201ENST00000272322 PLXNB3Q9ULL4 1909 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 M0R3H8 397 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 WWP2O00308 870 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 MID1O15344 667 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 KLHL18O94889 574 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 CISD3P0C7P0 127 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 TPP2P29144 1249 aaPredicted RBP15.85■□□□□ 0.13
VPS54-201ENST00000272322 CNR2P34972 360 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 PTGES3Q15185 160 aaKnown RBP15.85■□□□□ 0.13
VPS54-201ENST00000272322 SYPL1Q16563 259 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 PSRC1Q6PGN9 363 aaPredicted RBP15.85■□□□□ 0.13
VPS54-201ENST00000272322 ADGRF3Q8IZF5 1079 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 COL26A1Q96A83 441 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 CENPOQ9BU64 300 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 FBXW2Q9UKT8 454 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 SLC31A1O15431 190 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 OR12D1P0DN82 309 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 TGM4P49221 684 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 GABARAPL2P60520 117 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 MXD1Q05195 221 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 VEZF1Q14119 521 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 C2orf27AQ580R0 203 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 TMEM203Q969S6 136 aa15.85■□□□□ 0.13
VPS54-201ENST00000272322 COQ8BQ96D53 544 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms