RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 OR10G6Q8NH81 332 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 UBXN10Q96LJ8 280 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 BRINP2Q9C0B6 783 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 PHPT1Q9NRX4 125 aaPredicted RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 MED11Q9P086 117 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 SRRDQ9UH36 339 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 GJD2Q9UKL4 321 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 INSL5Q9Y5Q6 135 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 A0A0G2JPF8 293 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 HNRNPCL3B7ZW38 293 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 PCCBP05166 539 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 HNRNPCL4P0DMR1 293 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 PFKLP17858 780 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 IGFBP6P24592 240 aaPredicted RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 DNASE1P24855 282 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 ADRA1AP35348 466 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 MAGEA2P43356 314 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 SMSP52788 366 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 AP3S2P59780 193 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 TLE2Q04725 743 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 MAD2L1BPQ15013 274 aaPredicted RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 PROX2Q3B8N5 592 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 SLC35F1Q5T1Q4 408 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 STEAP3Q658P3 488 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 BRAT1Q6PJG6 821 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 HSDL2Q6YN16 418 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 NRARPQ7Z6K4 114 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 NOXA1Q86UR1 476 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 CELF2-AS1Q8N7Q2 184 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 COQ8AQ8NI60 647 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 MROQ9BYG7 248 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 GPRC5BQ9NZH0 403 aa11.11□□□□□ -0.63
VPS33A-201ENST00000267199 FBXO9Q9UK97 447 aaPredicted RBP11.11□□□□□ -0.63
VPS33A-201ENST00000267199 A0A1W2PPK0 400 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 TMEM88BA6NKF7 163 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 FAM170BA6NMN3 283 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 OR10H2O60403 315 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 SOCS5O75159 536 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 COQ9O75208 318 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 CNR2P34972 360 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 SOX3P41225 446 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 CRISP3P54108 245 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 GSTM4Q03013 218 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 CES4AQ5XG92 561 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 POMZP3Q6PJE2 187 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 B3GNT8Q7Z7M8 397 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 OR6K6Q8NGW6 343 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 PROKR1Q8TCW9 393 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 SLC22A17Q8WUG5 538 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 GATAD2BQ8WXI9 593 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 ZBED6CLQ96FA7 236 aaPredicted RBP11.1□□□□□ -0.63
VPS33A-201ENST00000267199 ACOT13Q9NPJ3 140 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 FKBP7Q9Y680 259 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 MAU2Q9Y6X3 613 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 DLEC1Q9Y238 1755 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 LOC285095A0A1B0GVY8 99 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 MEIOCA2RUB1 952 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 ETFAP13804 333 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 PTPN2P17706 415 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 RGRP47804 291 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 RPS26P62854 115 aaKnown RBP11.1□□□□□ -0.63
VPS33A-201ENST00000267199 COL9A2Q14055 689 aaPredicted RBP11.1□□□□□ -0.63
VPS33A-201ENST00000267199 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF311Q5JNZ3 666 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 FAM180BQ6P0A1 224 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 TBPL2Q6SJ96 375 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 SUSD1Q6UWL2 747 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 SHFQ7M4L6 423 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 LINC01465Q8N7H1 131 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 GPR150Q8NGU9 434 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 MARK1Q9P0L2 795 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 NME7Q9Y5B8 376 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 KIAA0100Q14667 2235 aaKnown RBP11.1□□□□□ -0.63
VPS33A-201ENST00000267199 J3QLW9 94 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 NUPL2O15504 423 aaKnown RBP11.1□□□□□ -0.63
VPS33A-201ENST00000267199 RB1P06400 928 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 SRPRAP08240 638 aaKnown RBP11.1□□□□□ -0.63
VPS33A-201ENST00000267199 ZNF19P17023 458 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 ACRV1P26436 265 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 RGS1Q08116 209 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 LARS2Q15031 903 aaKnown RBP11.1□□□□□ -0.63
VPS33A-201ENST00000267199 RUNDC3AQ59EK9 446 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 GARNL3Q5VVW2 1013 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 RTL4Q6ZR62 310 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 SPRED1Q7Z699 444 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 SLAIN1Q8ND83 568 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 MDGA1Q8NFP4 955 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 OR4C6Q8NH72 309 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 MOSPD2Q8NHP6 518 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 SLC6A15Q9H2J7 730 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 LTB4R2Q9NPC1 389 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 IL17CQ9P0M4 197 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 DLGAP4Q9Y2H0 992 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 MAB21L2Q9Y586 359 aa11.1□□□□□ -0.63
VPS33A-201ENST00000267199 CFAP20Q9Y6A4 193 aaKnown RBP11.1□□□□□ -0.63
VPS33A-201ENST00000267199 NHSQ6T4R5 1651 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CSN2P05814 226 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CASP3P42574 277 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 CRISP1P54107 249 aa11.09□□□□□ -0.63
VPS33A-201ENST00000267199 LMAN2Q12907 356 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms