RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 TRIM16LQ309B1 348 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 HIST2H2AA3Q6FI13 130 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 CEACAM20Q6UY09 585 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 FAM43BQ6ZT52 329 aaPredicted RBP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 RBM45Q8IUH3 476 aaKnown RBP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 HOMEZQ8IX15 550 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 GPR65Q8IYL9 337 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 METTL4Q8N3J2 472 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 OR4C15Q8NGM1 316 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 REPS1Q96D71 796 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 ZHX1-C8orf76Q96EF9 292 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 PRAP1Q96NZ9 151 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 ALPK1Q96QP1 1244 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 FAM129BQ96TA1 746 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 SLIRPQ9GZT3 109 aaKnown RBP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 EHD1Q9H4M9 534 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 ACER3Q9NUN7 267 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 ATAD3AQ9NVI7 634 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 CORO2BQ9UQ03 480 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 PCDHGA2Q9Y5H1 932 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 C2orf16Q68DN1 1984 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 TRBC2A0A5B9 178 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 FOXE1O00358 373 aaPredicted RBP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 TLL1O43897 1013 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 CBFA2T3O75081 653 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 PRKRAO75569 313 aaKnown RBP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 PRNPP04156 253 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 PCCBP05166 539 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 HOXB6P17509 224 aaKnown RBP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 DDX6P26196 483 aaKnown RBP eCLIP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 CLK1P49759 484 aaKnown RBP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 BCAP31P51572 246 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 LIM2P55344 173 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 PDE7AQ13946 482 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 ZNF234Q14588 700 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 MICAQ29983 383 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 HEATR4Q86WZ0 1026 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 MFSD4AQ8N468 514 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 DNAJC22Q8N4W6 341 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 HORMAD2Q8N7B1 307 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 AQP11Q8NBQ7 271 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 TFGQ92734 400 aaPredicted RBP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 ZNF707Q96C28 371 aaPredicted RBP10.37□□□□□ -0.75
TCTN3-201ENST00000265993 HMG20AQ9NP66 347 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 NECTIN3Q9NQS3 549 aa10.37□□□□□ -0.75
TCTN3-201ENST00000265993 ANKDD1BA6NHY2 528 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 FFAR1O14842 300 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 B4GALT2O60909 372 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 GASTP01350 101 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 SERPIND1P05546 499 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 ALPPL2P10696 532 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 BMPR1AP36894 532 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 OPRD1P41143 372 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 CTSKP43235 329 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 RELAQ04206 551 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 PCDH1Q08174 1060 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 ST3GAL4Q11206 333 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 PTGES3Q15185 160 aaKnown RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 TIGD6Q17RP2 521 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 BCL7AQ4VC05 210 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 WDR53Q7Z5U6 358 aaPredicted RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 KLHDC8AQ8IYD2 350 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 CLIP4Q8N3C7 705 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 SVOPQ8N4V2 548 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 GOT1L1Q8NHS2 421 aaPredicted RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 RHOXF1Q8NHV9 184 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 KLK6Q92876 244 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 POP5Q969H6 163 aaKnown RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 EXOSC8Q96B26 276 aaKnown RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 METTL2AQ96IZ6 378 aaKnown RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 LRIG1Q96JA1 1093 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 ZNF717Q9BY31 904 aaPredicted RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 ITPAQ9BY32 194 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 OR51E2Q9H255 320 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 DCSTAMPQ9H295 470 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 OR52A5Q9H2C5 316 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 MYNNQ9NPC7 610 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 TBCCD1Q9NVR7 557 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 PSORS1C1Q9UIG5 152 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 NUP210Q8TEM1 1887 aaPredicted RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 TRBV4-1A0A0J9YWV2 114 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 PRR23AA6NEV1 266 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 GLOD5A6NK44 160 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 E9PQ18 207 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 AIREO43918 545 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 TPST2O60704 377 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 DNAJB5O75953 348 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 GADD45GO95257 159 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 SRPRAP08240 638 aaKnown RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 DBTP11182 482 aaKnown RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 MAGP20916 626 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 ITGB7P26010 798 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 FCHO2Q0JRZ9 810 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 ZNF846Q147U1 533 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 DGUOKQ16854 277 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 HNRNPA1L2Q32P51 320 aaKnown RBP10.36□□□□□ -0.75
TCTN3-201ENST00000265993 TRIM40Q6P9F5 258 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 SLC9B2Q86UD5 537 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 FAM129CQ86XR2 697 aa10.36□□□□□ -0.75
TCTN3-201ENST00000265993 ETFBKMTQ8IXQ9 262 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms