RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 DDIASQ8IXT1 998 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 ZNF248Q8NDW4 579 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 PLPP5Q8NEB5 264 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 MR1Q95460 341 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 TBC1D20Q96BZ9 403 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 TM4SF18Q96CE8 201 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 SORBS1Q9BX66 1292 aaKnown RBP13.47□□□□□ -0.25
SSBP1-201ENST00000265304 NUF2Q9BZD4 464 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 CCDC86Q9H6F5 360 aaKnown RBP13.47□□□□□ -0.25
SSBP1-201ENST00000265304 AKTIPQ9H8T0 292 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 KCNK13Q9HB14 408 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 C14orf105Q9NVL8 296 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 ZNF282Q9UDV7 671 aaPredicted RBP13.47□□□□□ -0.25
SSBP1-201ENST00000265304 NDOR1Q9UHB4 597 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 PHF11Q9UIL8 331 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 FARSAQ9Y285 508 aaKnown RBP13.47□□□□□ -0.25
SSBP1-201ENST00000265304 CLDN16Q9Y5I7 305 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 LOC101059948A0A1B0GTJ6 334 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 TBX19O60806 448 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 GUCY1B2O75343 617 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 SH3BGRLO75368 114 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 SEC22BO75396 215 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 KLK1P06870 262 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 ZGLP1P0C6A0 271 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 FAM58BPP0C7Q3 252 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 TCN2P20062 427 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 LSP1P33241 339 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 MRPL19P49406 292 aaKnown RBP13.46□□□□□ -0.25
SSBP1-201ENST00000265304 HNRNPH2P55795 449 aaKnown RBP13.46□□□□□ -0.25
SSBP1-201ENST00000265304 SLAMF1Q13291 335 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 DNASE1L3Q13609 305 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 IMPG1Q17R60 797 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 ATP6AP1LQ52LC2 224 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 ARHGAP40Q5TG30 622 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 FAM199XQ6PEV8 388 aaPredicted RBP13.46□□□□□ -0.25
SSBP1-201ENST00000265304 GPR180Q86V85 440 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 ZNF595Q8IYB9 648 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 KDF1Q8NAX2 398 aaPredicted RBP13.46□□□□□ -0.25
SSBP1-201ENST00000265304 C7orf57Q8NEG2 295 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 OR5T3Q8NGG3 340 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 OR2Y1Q8NGV0 311 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 STT3BQ8TCJ2 826 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 CT55Q8WUE5 264 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 COL26A1Q96A83 441 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 MAPKAP1Q9BPZ7 522 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 CCDC28BQ9BUN5 200 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 EFHD1Q9BUP0 239 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 COPS7BQ9H9Q2 264 aaPredicted RBP13.46□□□□□ -0.25
SSBP1-201ENST00000265304 TAS2R7Q9NYW3 318 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 IFT80Q9P2H3 777 aaPredicted RBP13.46□□□□□ -0.25
SSBP1-201ENST00000265304 TRPC4Q9UBN4 977 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 KCND3Q9UK17 655 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 FIS1Q9Y3D6 152 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 ATG4BQ9Y4P1 393 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 MAU2Q9Y6X3 613 aa13.46□□□□□ -0.25
SSBP1-201ENST00000265304 EPG5Q9HCE0 2579 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 IGKV3D-11A0A0A0MRZ8 115 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 A0A0G2JN53 185 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 ATP6AP2A0A1C7CYW4 349 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 A0A1W2PR48 441 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 SYNDIG1LA6NDD5 238 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 C9J4A7 227 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 SHOX2O60902 331 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-201ENST00000265304 SKAP2O75563 359 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-201ENST00000265304 ATP6AP2O75787 350 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 FHP07954 510 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 PRPS2P11908 318 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 BCKDHAP12694 445 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 DRD2P14416 443 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 F8A1P23610 371 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 PTPN4P29074 926 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 EIF2S3P41091 472 aaKnown RBP13.45□□□□□ -0.26
SSBP1-201ENST00000265304 XCR1P46094 333 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 IDH3AP50213 366 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 HSD17B7P56937 341 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 ERVK-8P63133 956 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 IRX1P78414 480 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-201ENST00000265304 IGLV3-21P80748 117 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-201ENST00000265304 MAT1AQ00266 395 aaKnown RBP13.45□□□□□ -0.26
SSBP1-201ENST00000265304 MAD2L1Q13257 205 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-201ENST00000265304 BIKQ13323 160 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 NR6A1Q15406 480 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 PDCD2Q16342 344 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-201ENST00000265304 SPDYAQ5MJ70 313 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 CCNYL2Q5T2Q4 361 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 CGB2Q6NT52 195 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 QSOX2Q6ZRP7 698 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 IKBIPQ70UQ0 350 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 SCUBE1Q8IWY4 988 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 SHISA5Q8N114 240 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 CEP70Q8NHQ1 597 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 TUBGCP3Q96CW5 907 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 CHMP6Q96FZ7 201 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 SLC45A3Q96JT2 553 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 MYNNQ9NPC7 610 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 EHD3Q9NZN3 535 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 CTSFQ9UBX1 484 aa13.45□□□□□ -0.26
SSBP1-201ENST00000265304 MARCOQ9UEW3 520 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-201ENST00000265304 CROTQ9UKG9 612 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms