RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PTGDR2Q9Y5Y4 395 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF705EA8MWA4 302 aaPredicted RBP17.34■□□□□ 0.37
COL5A3-201ENST00000264828 KDELR3O43731 214 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 PAFAH1B3Q15102 231 aaKnown RBP17.34■□□□□ 0.37
COL5A3-201ENST00000264828 MS4A13Q5J8X5 152 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 SNED1Q8TER0 1413 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 CREB3L1Q96BA8 519 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 FBXL18Q96ME1 805 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 NSUN5Q96P11 429 aaKnown RBP17.34■□□□□ 0.37
COL5A3-201ENST00000264828 MCHR1Q99705 422 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF649Q9BS31 505 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 NPLQ9BXD5 320 aaPredicted RBP17.34■□□□□ 0.37
COL5A3-201ENST00000264828 POLDIP3Q9BY77 421 aaKnown RBP17.34■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF451Q9Y4E5 1061 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 ARFGEF2Q9Y6D5 1785 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 PPM1BO75688 479 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 OR12D1P0DN82 309 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 S100A12P80511 92 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 PTGR1Q14914 329 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 OSTM1Q86WC4 334 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 TIGD4Q8IY51 512 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 CMTM8Q8IZV2 173 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 TSTD1Q8NFU3 115 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 CNTN5O94779 1100 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 SLC9A3P48764 834 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 COL9A2Q14055 689 aaPredicted RBP17.34■□□□□ 0.37
COL5A3-201ENST00000264828 GPAT4Q86UL3 456 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF384Q8TF68 577 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 DKKL1Q9UK85 242 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 HIF3AQ9Y2N7 669 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 SLC45A1Q9Y2W3 748 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 PCDHB11Q9Y5F2 797 aa17.34■□□□□ 0.37
COL5A3-201ENST00000264828 PRSS51A0A1B0GVH4 220 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 CAPN14A8MX76 684 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 H7C2Y5 167 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 IL33O95760 270 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 STT3AP46977 705 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF41P51814 821 aaPredicted RBP17.33■□□□□ 0.37
COL5A3-201ENST00000264828 PRMT2P55345 433 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 ATP6AP1Q15904 470 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 NEIL3Q8TAT5 605 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 ZUFSPQ96AP4 578 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 A0A1W2PQ45 241 aaPredicted RBP17.33■□□□□ 0.37
COL5A3-201ENST00000264828 A0A1W2PQY0 241 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 FZD9O00144 591 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 GRPRP30550 384 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 GNRHRP30968 328 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 LRP8Q14114 963 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 TRAM2Q15035 370 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 REEP3Q6NUK4 255 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 TIFABQ6ZNK6 161 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 BRF2Q9HAW0 419 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 SEC14L4Q9UDX3 406 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 TMEM59LQ9UK28 342 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 WDR45Q9Y484 360 aa17.33■□□□□ 0.37
COL5A3-201ENST00000264828 CELP19835 753 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 MAGEA11P43364 429 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 TMEM151AQ8N4L1 468 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 TUBA1CQ9BQE3 449 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 ZNF701Q9NV72 531 aaPredicted RBP17.33■□□□□ 0.36
COL5A3-201ENST00000264828 ADAMTS6Q9UKP5 1117 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 WNT6Q9Y6F9 365 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 TEX13CA0A0J9YWL9 993 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 C12orf71A8MTZ7 269 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 PLD2O14939 933 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 OAS1P00973 400 aaKnown RBP17.33■□□□□ 0.36
COL5A3-201ENST00000264828 TYRP1P17643 537 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 GRB7Q14451 532 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 CARM1Q86X55 608 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 TMEM156Q8N614 296 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 SMOC2Q9H3U7 446 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 NLE1Q9NVX2 485 aaPredicted RBP17.33■□□□□ 0.36
COL5A3-201ENST00000264828 SARDHQ9UL12 918 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 KCNS2Q9ULS6 477 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 LCHNA4D1U4 455 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 NAA10P41227 235 aaPredicted RBP17.33■□□□□ 0.36
COL5A3-201ENST00000264828 FPGSQ05932 587 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 C22orf42Q6IC83 251 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 CCDC28AQ8IWP9 274 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 SLC35F5Q8WV83 523 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 TP63Q9H3D4 680 aaPredicted RBP17.33■□□□□ 0.36
COL5A3-201ENST00000264828 PAK1IP1Q9NWT1 392 aaPredicted RBP17.33■□□□□ 0.36
COL5A3-201ENST00000264828 WASF3Q9UPY6 502 aa17.33■□□□□ 0.36
COL5A3-201ENST00000264828 C9J4A7 227 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 DLDP09622 509 aaKnown RBP17.32■□□□□ 0.36
COL5A3-201ENST00000264828 KCNAB2Q13303 367 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 TPGS2Q68CL5 300 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 FIP1L1Q6UN15 594 aaKnown RBP17.32■□□□□ 0.36
COL5A3-201ENST00000264828 SUN3Q8TAQ9 357 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 SUSD3Q96L08 255 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 CMKLR1Q99788 373 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 TMEM9Q9P0T7 183 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 PDYNP01213 254 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 ZNF14P17017 642 aaPredicted RBP17.32■□□□□ 0.36
COL5A3-201ENST00000264828 GARNL3Q5VVW2 1013 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 PQLC3Q8N755 202 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 OR9A1PQ8NGU1 263 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 FBXL12Q9NXK8 326 aa17.32■□□□□ 0.36
COL5A3-201ENST00000264828 PTBP2Q9UKA9 531 aaKnown RBP17.32■□□□□ 0.36
COL5A3-201ENST00000264828 CDC123O75794 336 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms