RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 KLC3Q6P597 504 aa15.03■□□□□ -0
USE1-201ENST00000263897 CHSY3Q70JA7 882 aa15.03■□□□□ -0
USE1-201ENST00000263897 ARMC10Q8N2F6 343 aa15.03■□□□□ -0
USE1-201ENST00000263897 FAM47BQ8NA70 645 aa15.03■□□□□ -0
USE1-201ENST00000263897 DEFB126Q9BYW3 111 aa15.03■□□□□ -0
USE1-201ENST00000263897 VPS11Q9H270 941 aa15.03■□□□□ -0
USE1-201ENST00000263897 COPS7BQ9H9Q2 264 aaPredicted RBP15.03■□□□□ -0
USE1-201ENST00000263897 PNO1Q9NRX1 252 aaKnown RBP15.03■□□□□ -0
USE1-201ENST00000263897 ADGRE2Q9UHX3 823 aa15.03■□□□□ -0
USE1-201ENST00000263897 PPIEQ9UNP9 301 aaKnown RBP15.03■□□□□ -0
USE1-201ENST00000263897 ANGPTL3Q9Y5C1 460 aa15.03■□□□□ -0
USE1-201ENST00000263897 LRRTM2O43300 516 aa15.02■□□□□ -0
USE1-201ENST00000263897 MYO1DO94832 1006 aa15.02■□□□□ -0
USE1-201ENST00000263897 INHBAP08476 426 aa15.02■□□□□ -0
USE1-201ENST00000263897 STSP08842 583 aa15.02■□□□□ -0
USE1-201ENST00000263897 PCNAP12004 261 aa15.02■□□□□ -0
USE1-201ENST00000263897 GFAPP14136 432 aa15.02■□□□□ -0
USE1-201ENST00000263897 CD46P15529 392 aa15.02■□□□□ -0
USE1-201ENST00000263897 ATP5A1P25705 553 aaKnown RBP15.02■□□□□ -0
USE1-201ENST00000263897 MST1P26927 711 aa15.02■□□□□ -0
USE1-201ENST00000263897 SERPINB9P50453 376 aa15.02■□□□□ -0
USE1-201ENST00000263897 GPR143P51810 404 aa15.02■□□□□ -0
USE1-201ENST00000263897 OC90Q02509 493 aaPredicted RBP15.02■□□□□ -0
USE1-201ENST00000263897 SRSF11Q05519 484 aaKnown RBP15.02■□□□□ -0
USE1-201ENST00000263897 PCBP2Q15366 365 aaKnown RBP eCLIP15.02■□□□□ -0
USE1-201ENST00000263897 AP5B1Q2VPB7 878 aa15.02■□□□□ -0
USE1-201ENST00000263897 DEPDC1Q5TB30 811 aa15.02■□□□□ -0
USE1-201ENST00000263897 ZNF468Q5VIY5 522 aaPredicted RBP15.02■□□□□ -0
USE1-201ENST00000263897 LIPJQ5W064 366 aa15.02■□□□□ -0
USE1-201ENST00000263897 GRHL2Q6ISB3 625 aa15.02■□□□□ -0
USE1-201ENST00000263897 PLD6Q8N2A8 252 aaKnown RBP15.02■□□□□ -0
USE1-201ENST00000263897 HORMAD2Q8N7B1 307 aa15.02■□□□□ -0
USE1-201ENST00000263897 ACOT4Q8N9L9 421 aa15.02■□□□□ -0
USE1-201ENST00000263897 APCDD1LQ8NCL9 501 aa15.02■□□□□ -0
USE1-201ENST00000263897 B3GNT7Q8NFL0 401 aa15.02■□□□□ -0
USE1-201ENST00000263897 KIF18AQ8NI77 898 aa15.02■□□□□ -0
USE1-201ENST00000263897 CMTM7Q96FZ5 175 aa15.02■□□□□ -0
USE1-201ENST00000263897 SCMH1Q96GD3 660 aa15.02■□□□□ -0
USE1-201ENST00000263897 LYRM4Q9HD34 91 aa15.02■□□□□ -0
USE1-201ENST00000263897 KLHL1Q9NR64 748 aa15.02■□□□□ -0
USE1-201ENST00000263897 LRFN1Q9P244 771 aa15.02■□□□□ -0
USE1-201ENST00000263897 TSC22D4Q9Y3Q8 395 aa15.02■□□□□ -0
USE1-201ENST00000263897 IKBKGQ9Y6K9 419 aa15.02■□□□□ -0
USE1-201ENST00000263897 LRRC14BA6NHZ5 514 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 SH3BGRLO75368 114 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 NEURL1O76050 574 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 SP1P08047 785 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 TPP2P29144 1249 aaPredicted RBP15.01□□□□□ -0.01
USE1-201ENST00000263897 EEF1DP29692 281 aaKnown RBP15.01□□□□□ -0.01
USE1-201ENST00000263897 PPP2R1BP30154 601 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 PIK3CBP42338 1070 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 MAGEA12P43365 314 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 CLCN2P51788 898 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 PMP22Q01453 160 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 KHDRBS2Q5VWX1 349 aaKnown RBP15.01□□□□□ -0.01
USE1-201ENST00000263897 SLC25A25Q6KCM7 469 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 GFRALQ6UXV0 394 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 ZNF793Q6ZN11 406 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 TMEM178AQ8NBL3 297 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 ISL2Q96A47 359 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 CSF3RQ99062 836 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 PAFAH2Q99487 392 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 MAPKAP1Q9BPZ7 522 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 HES7Q9BYE0 225 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 ALOXE3Q9BYJ1 711 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 OR51B5Q9H339 312 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 TRIM45Q9H8W5 580 aaPredicted RBP15.01□□□□□ -0.01
USE1-201ENST00000263897 IPPKQ9H8X2 491 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 PRM3Q9NNZ6 103 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 ZNF358Q9NW07 568 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 CPSF2Q9P2I0 782 aaKnown RBP15.01□□□□□ -0.01
USE1-201ENST00000263897 PCDHGA11Q9Y5H2 935 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 TNPO3Q9Y5L0 923 aaKnown RBP15.01□□□□□ -0.01
USE1-201ENST00000263897 CENPEQ02224 2701 aa15.01□□□□□ -0.01
USE1-201ENST00000263897 A1L4Q6 167 aa15□□□□□ -0.01
USE1-201ENST00000263897 SYNDIG1LA6NDD5 238 aa15□□□□□ -0.01
USE1-201ENST00000263897 RTCAO00442 366 aaKnown RBP15□□□□□ -0.01
USE1-201ENST00000263897 KRT38O76015 456 aa15□□□□□ -0.01
USE1-201ENST00000263897 WISP2O76076 250 aa15□□□□□ -0.01
USE1-201ENST00000263897 SCELO95171 688 aa15□□□□□ -0.01
USE1-201ENST00000263897 RBP1P09455 135 aa15□□□□□ -0.01
USE1-201ENST00000263897 HIST1H1TP22492 207 aaPredicted RBP15□□□□□ -0.01
USE1-201ENST00000263897 TRHRP34981 398 aaPredicted RBP15□□□□□ -0.01
USE1-201ENST00000263897 CYB561P49447 251 aa15□□□□□ -0.01
USE1-201ENST00000263897 KCNK10P57789 538 aa15□□□□□ -0.01
USE1-201ENST00000263897 GTF2H2Q13888 395 aa15□□□□□ -0.01
USE1-201ENST00000263897 TECRLQ5HYJ1 363 aa15□□□□□ -0.01
USE1-201ENST00000263897 HIST2H2BCQ6DN03 193 aa15□□□□□ -0.01
USE1-201ENST00000263897 OR4C11Q6IEV9 310 aa15□□□□□ -0.01
USE1-201ENST00000263897 GTF2H2CQ6P1K8 395 aa15□□□□□ -0.01
USE1-201ENST00000263897 METTL2BQ6P1Q9 378 aaKnown RBP15□□□□□ -0.01
USE1-201ENST00000263897 CLNKQ7Z7G1 428 aa15□□□□□ -0.01
USE1-201ENST00000263897 ZNF227Q86WZ6 799 aa15□□□□□ -0.01
USE1-201ENST00000263897 MYLK4Q86YV6 388 aaPredicted RBP15□□□□□ -0.01
USE1-201ENST00000263897 TMEM132CQ8N3T6 1108 aa15□□□□□ -0.01
USE1-201ENST00000263897 RNF175Q8N4F7 328 aa15□□□□□ -0.01
USE1-201ENST00000263897 HUS1BQ8NHY5 278 aa15□□□□□ -0.01
USE1-201ENST00000263897 RGMAQ96B86 450 aa15□□□□□ -0.01
USE1-201ENST00000263897 VMP1Q96GC9 406 aa15□□□□□ -0.01
USE1-201ENST00000263897 ACTR8Q9H981 624 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms