RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ANGPTL3Q9Y5C1 460 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 CPAMD8Q8IZJ3 1885 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 CRYBG3Q68DQ2 2970 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 IGKV3D-11A0A0A0MRZ8 115 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 MYOCOSA0A1B0GUC4 107 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 FAM166BA8MTA8 275 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 WWP2O00308 870 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 PHGDHO43175 533 aaKnown RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 OR2J2O76002 312 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 SMIM10L1P0DMW3 83 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 TFEBP19484 476 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 IVDP26440 423 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 CERS1P27544 350 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 PPP2R1BP30154 601 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 MSH2P43246 934 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 KCNC1P48547 511 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 RAP1GDS1P52306 607 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 PPIAP62937 165 aaKnown RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 SERTAD2Q14140 314 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 SLMAPQ14BN4 828 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 FASTKD3Q14CZ7 662 aaKnown RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 ELAVL1Q15717 326 aaKnown RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 AP5B1Q2VPB7 878 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 FBXO48Q5FWF7 155 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 GK5Q6ZS86 529 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 MAATS1Q7Z4T9 603 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 TBC1D1Q86TI0 1168 aaPredicted RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 SLC22A16Q86VW1 577 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 CCDC25Q86WR0 208 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 C7orf57Q8NEG2 295 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 NFAM1Q8NET5 270 aaPredicted RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 OR5M3Q8NGP4 307 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 OR10Q1Q8NGQ4 319 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 OR14A16Q8NHC5 309 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 RND1Q92730 232 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 SMIM10Q96HG1 83 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 KCNC2Q96PR1 638 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 ALOXE3Q9BYJ1 711 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 PHACTR1Q9C0D0 580 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 TP63Q9H3D4 680 aaPredicted RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 LDAHQ9H6V9 325 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 NT5DC2Q9H857 520 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 TRIM45Q9H8W5 580 aaPredicted RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 LIN28AQ9H9Z2 209 aaKnown RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 GRPEL1Q9HAV7 217 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 RNF14Q9UBS8 474 aa11.41□□□□□ -0.58
TRAF4-202ENST00000262396 MTO1Q9Y2Z2 717 aaKnown RBP11.41□□□□□ -0.58
TRAF4-202ENST00000262396 CTAGE15A4D2H0 777 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 FAM90A27PA6NNH2 459 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 SUPT3HB4E1H0 165 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 CTNSO60931 367 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 SH3BGRLO75368 114 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 SUPT3HO75486 399 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 PIAS1O75925 651 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 P04436 131 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 CPN2P22792 545 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 HNRNPH1P31943 449 aaKnown RBP11.4□□□□□ -0.58
TRAF4-202ENST00000262396 SPRP35270 261 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-202ENST00000262396 ARL1P40616 181 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-202ENST00000262396 SSR2P43308 183 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 SLC6A12P48065 614 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 LIM2P55344 173 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 TLE4Q04727 773 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 CHIT1Q13231 466 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 DOC2AQ14183 400 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 RNFT1Q5M7Z0 435 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 ABHD17CQ6PCB6 329 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 FAM47EQ6ZV65 393 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 CHSY3Q70JA7 882 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 MDGA2Q7Z553 956 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 CTAGE6Q86UF2 777 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 CREG2Q8IUH2 290 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 SCUBE1Q8IWY4 988 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 APCDD1LQ8NCL9 501 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 PSD4Q8NDX1 1056 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 STAG3L4Q8TBR4 150 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 ESAMQ96AP7 390 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 DGAT2Q96PD7 388 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 F2RL3Q96RI0 385 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 CPNE1Q99829 537 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 PLAC1Q9HBJ0 212 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 MOCS1Q9NZB8 636 aa11.4□□□□□ -0.58
TRAF4-202ENST00000262396 C17orf105B2RV13 164 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 C4orf51C9J302 202 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 NPIPA2E9PIF3 369 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 NPIPA3F8WFD2 350 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 G3V3Y1 287 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 C19orf84I3L1E1 186 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 CAPN3P20807 821 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 SSTR1P30872 391 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 CHRNB4P30926 498 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 TLX1P31314 330 aaPredicted RBP11.39□□□□□ -0.59
TRAF4-202ENST00000262396 GP5P40197 560 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 RPL21P46778 160 aaKnown RBP11.39□□□□□ -0.59
TRAF4-202ENST00000262396 RAB10P61026 200 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 PHEXP78562 749 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 MRPS25P82663 173 aaKnown RBP11.39□□□□□ -0.59
TRAF4-202ENST00000262396 DDX39BQ13838 428 aaKnown RBP11.39□□□□□ -0.59
TRAF4-202ENST00000262396 CDKL4Q5MAI5 379 aa11.39□□□□□ -0.59
TRAF4-202ENST00000262396 MED27Q6P2C8 311 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms