RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CD1EP15812 388 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 CAPN3P20807 821 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 GPX3P22352 226 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 STX1BP61266 288 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 MXRA7P84157 204 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 NAE1Q13564 534 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 ABRAXAS2Q15018 415 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 MAPRE2Q15555 327 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 GSTA3Q16772 222 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 SMU1Q2TAY7 513 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 SCIMPQ6UWF3 145 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 TRIM46Q7Z4K8 759 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 MRGPRGQ86SM5 289 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 THOC6Q86W42 341 aaKnown RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 RBM12BQ8IXT5 1001 aaKnown RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 GALNT16Q8N428 558 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 CLEC1AQ8NC01 280 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 FAR1Q8WVX9 515 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 RELTQ969Z4 430 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 CXorf40BQ96DE9 158 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 C12orf66Q96MD2 445 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 ACTR8Q9H981 624 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 INTS7Q9NVH2 962 aaKnown RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 GIMAP2Q9UG22 337 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 CCL27Q9Y4X3 112 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 CSAG2Q9Y5P2 127 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 HEBP2Q9Y5Z4 205 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 FER1L5A0AVI2 2057 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 SERTM1A2A2V5 107 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 SLC28A1O00337 649 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 PRAMEF4O60810 478 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 PEX11AO75192 247 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 KRT6AP02538 564 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 KRT6BP04259 564 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 MTHFD1P11586 935 aaKnown RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 IDO1P14902 403 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 NDUFS1P28331 727 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 KRT6CP48668 564 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 ERVK-8P63133 956 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 FASTKQ14296 549 aaKnown RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 GPR18Q14330 331 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 GPR19Q15760 415 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 RPE65Q16518 533 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 ATP6AP1LQ52LC2 224 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 C6orf136Q5SQH8 315 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 PRAMEF17Q5VTA0 474 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 PRAMEF9Q5VWM5 478 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 LIPJQ5W064 366 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 FBXW10Q5XX13 1052 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 LRRC56Q8IYG6 542 aaPredicted RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 DSELQ8IZU8 1212 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 ZNF480Q8WV37 535 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 TFGQ92734 400 aaPredicted RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 INSM2Q96T92 566 aaPredicted RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 WDR77Q9BQA1 342 aaPredicted RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 IMP3Q9NV31 184 aaKnown RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 AIG1Q9NVV5 245 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 GPRC5BQ9NZH0 403 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 SEMA5BQ9P283 1151 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 SUCOQ9UBS9 1254 aaKnown RBP12.62□□□□□ -0.39
SGCA-201ENST00000262018 GPR45Q9Y5Y3 372 aa12.62□□□□□ -0.39
SGCA-201ENST00000262018 FFAR3O14843 346 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 LSM1O15116 133 aaKnown RBP12.61□□□□□ -0.39
SGCA-201ENST00000262018 GPR42O15529 346 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 RGS14O43566 566 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 ULK1O75385 1050 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 RPN2P04844 631 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 ITGAXP20702 1163 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 PGM1P36871 562 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 CASP2P42575 452 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 SLC25A3Q00325 362 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 EMX2Q04743 252 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 CHIT1Q13231 466 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 CUL3Q13618 768 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 E2F2Q14209 437 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 AGKQ53H12 422 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 C6orf163Q5TEZ5 329 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 GK5Q6ZS86 529 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 MRGPREQ86SM8 312 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 DCUN1D3Q8IWE4 304 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 MIER2Q8N344 545 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 ZNF808Q8N4W9 903 aaPredicted RBP12.61□□□□□ -0.39
SGCA-201ENST00000262018 ZFPM2Q8WW38 1151 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 MCUR1Q96AQ8 359 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 RAD51AP1Q96B01 352 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 CLIP3Q96DZ5 547 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 PPP3R2Q96LZ3 170 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 FER1L6-AS2Q96M78 137 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 LRFN5Q96NI6 719 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 OR4K3Q96R72 315 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 MAP3K3Q99759 626 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 SGPP1Q9BX95 441 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 BRINP2Q9C0B6 783 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 RAB33BQ9H082 229 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 SDR39U1Q9NRG7 319 aaPredicted RBP12.61□□□□□ -0.39
SGCA-201ENST00000262018 TMEM45AQ9NWC5 275 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 NDE1Q9NXR1 346 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms