RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ZNF10P21506 573 aaPredicted RBP17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 HTR1EP28566 365 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 SPRP35270 261 aaPredicted RBP17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 MEOX1P50221 254 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 GPR143P51810 404 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 MTTPP55157 894 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 IRF8Q02556 426 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 CHIT1Q13231 466 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 EFTUD2Q15029 972 aaKnown RBP eCLIP17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 CDKL4Q5MAI5 379 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 GRTP1Q5TC63 336 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 MTFR2Q6P444 385 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 RPTNQ6XPR3 784 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 CYS1Q717R9 158 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 MDGA2Q7Z553 956 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 SULF2Q8IWU5 870 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 MCEMP1Q8IX19 187 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 ARMC10Q8N2F6 343 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 TMEM156Q8N614 296 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 FBXO25Q8TCJ0 367 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 WDR34Q96EX3 536 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 VMP1Q96GC9 406 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 SEC16BQ96JE7 1060 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 CD244Q9BZW8 370 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 PITHD1Q9GZP4 211 aaPredicted RBP17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 PRDM7Q9NQW5 492 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 DAPP1Q9UN19 280 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 MRPS33Q9Y291 106 aaKnown RBP17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 UTP11Q9Y3A2 253 aaKnown RBP17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 RTCAO00442 366 aaKnown RBP17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 IFNA16P05015 189 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 SLC35E2BP0CK96 405 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 ABOP16442 354 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 TFEBP19484 476 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 CASQ1P31415 396 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 PTGER1P34995 402 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 MSH2P43246 934 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 MAGEA4P43358 317 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 GPR85P60893 370 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 CDSNQ15517 529 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 TERF2Q15554 542 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 ZDHHC24Q6UX98 284 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 C3P1Q6ZMU1 363 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 BNC2Q6ZN30 1099 aaPredicted RBP17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 Q6ZPB1 254 aaPredicted RBP17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 UBE3DQ7Z6J8 389 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 ISCA2Q86U28 154 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 CHERPQ8IWX8 916 aaKnown RBP17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 ZNF595Q8IYB9 648 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 CYP4Z2PQ8N1L4 340 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 GHDCQ8N2G8 530 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 FBF1Q8TES7 1133 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 EFCAB11Q9BUY7 163 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 KLF2Q9Y5W3 355 aaPredicted RBP17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 TACC2O95359 2948 aa17.71■□□□□ 0.43
TM6SF1-201ENST00000258909 CACNA1CQ13936 2221 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 SUPT3HB4E1H0 165 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 UBXN8O00124 270 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 CDK2AP1O14519 115 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 SUPT3HO75486 399 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 GSTA2P09210 222 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 BMPR2Q13873 1038 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 HIST2H2ACQ16777 129 aaPredicted RBP17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 PAGE2BQ5JRK9 111 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 HIST2H2AA3Q6FI13 130 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 SYT10Q6XYQ8 523 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 ZNF793Q6ZN11 406 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 FGD2Q7Z6J4 655 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 STAG3L4Q8TBR4 150 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 AGAP11Q8TF27 550 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 MRRFQ96E11 262 aaKnown RBP17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 PHF12Q96QT6 1004 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 CCDC77Q9BR77 488 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 ADAP2Q9NPF8 381 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 PPIEQ9UNP9 301 aaKnown RBP17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 KLF13Q9Y2Y9 288 aaPredicted RBP17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 MEMO1Q9Y316 297 aa17.7■□□□□ 0.42
TM6SF1-201ENST00000258909 SAP18O00422 153 aaKnown RBP17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 PEX1O43933 1283 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 CTNSO60931 367 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 LDB3O75112 727 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 ZFAND5O76080 213 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 PCNAP12004 261 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 TNFRSF8P28908 595 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 HPDP32754 393 aaPredicted RBP17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 ID2Q02363 134 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 LAPTM5Q13571 262 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 ZNF630Q2M218 657 aaPredicted RBP17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 LRRC70Q7Z2Q7 622 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 TBC1D1Q86TI0 1168 aaPredicted RBP17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 DOLPP1Q86YN1 238 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 RNF175Q8N4F7 328 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 ZNF321PQ8N8H1 164 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 ZNF473Q8WTR7 871 aaKnown RBP17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 MAPKAP1Q9BPZ7 522 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 MS4A8Q9BY19 250 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 ALOXE3Q9BYJ1 711 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 IGSF5Q9NSI5 407 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 NUDT4Q9NZJ9 180 aa17.69■□□□□ 0.42
TM6SF1-201ENST00000258909 KCMF1Q9P0J7 381 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms