RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 DNAJA2O60884 412 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 BCAS2O75934 225 aaPredicted RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 EPN2O95208 641 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 ZBTB11O95625 1053 aaPredicted RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 EIF2S1P05198 315 aaKnown RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 ZCCHC18P0CG32 403 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 DDX5P17844 614 aaKnown RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 CERS1P27544 350 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 GABRA4P48169 554 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 EEFSECP57772 596 aaKnown RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 VSX2P58304 361 aaPredicted RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 MTPNP58546 118 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 SNRPNP63162 240 aaKnown RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 CFHR1Q03591 330 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 TRAP1Q12931 704 aaKnown RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 SQSTM1Q13501 440 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 FLOT2Q14254 428 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 PRSS53Q2L4Q9 553 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 MUM1Q2TAK8 710 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 DGLUCYQ7Z3D6 616 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 MCATQ8IVS2 390 aaKnown RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 ARHGEF39Q8N4T4 335 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 NATD1Q8N6N6 113 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 CSNK1A1LQ8N752 337 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 OR2I1PQ8NGU4 316 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 GOT1L1Q8NHS2 421 aaPredicted RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 CCDC74AQ96AQ1 378 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 ZNF285Q96NJ3 590 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 SERINC2Q96SA4 455 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 CCDC3Q9BQI4 270 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 FAIM2Q9BWQ8 316 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 NLNQ9BYT8 704 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 ALG2Q9H553 416 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 COPS7BQ9H9Q2 264 aaPredicted RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 EHD3Q9NZN3 535 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 SEMA5BQ9P283 1151 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.97□□□□□ -0.97
NIP7-202ENST00000254941 GMEB2Q9UKD1 530 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 ATG4BQ9Y4P1 393 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 SLC22A7Q9Y694 548 aa8.97□□□□□ -0.97
NIP7-202ENST00000254941 A0A1W2PR48 441 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 EME2A4GXA9 379 aaPredicted RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 FAM86C2PA6NEL3 165 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 PROM1O43490 865 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 ANP32DO95626 131 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 GSNP06396 782 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 ENGP17813 658 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 ALOX12P18054 663 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 ZNF10P21506 573 aaPredicted RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 CSF2RBP32927 897 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 FRKP42685 505 aaPredicted RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 ALDH9A1P49189 494 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 GSK3BP49841 420 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 HBA1P69905 142 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 LIPEQ05469 1076 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 BNIP2Q12982 314 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 CCNIQ14094 377 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 SELPLGQ14242 412 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 FXNQ16595 210 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 DEFB110Q30KQ9 67 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 AMZ1Q400G9 498 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 GTDC1Q4AE62 458 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 DEFB134Q4QY38 66 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 GUSBP11Q6P575 273 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 PTRH1Q86Y79 214 aaKnown RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 EID2Q8N6I1 236 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 Q8N9G6 341 aaPredicted RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 ZCCHC10Q8TBK6 192 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 JADE3Q92613 823 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 CIDECQ96AQ7 238 aaPredicted RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 AURKBQ96GD4 344 aaPredicted RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 ECSITQ9BQ95 431 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 CPPED1Q9BRF8 314 aaPredicted RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 PCDHAC1Q9H158 963 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 ARRDC1-AS1Q9H2J1 176 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 RASSF4Q9H2L5 321 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 IKZF5Q9H5V7 419 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 KAT8Q9H7Z6 458 aaKnown RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 DCLRE1BQ9H816 532 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 PDE7BQ9NP56 450 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 LYARQ9NX58 379 aaKnown RBP8.96□□□□□ -0.97
NIP7-202ENST00000254941 BCAP29Q9UHQ4 241 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 AP3M1Q9Y2T2 418 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 GMEB1Q9Y692 573 aa8.96□□□□□ -0.97
NIP7-202ENST00000254941 C1orf226A1L170 272 aa8.96□□□□□ -0.98
NIP7-202ENST00000254941 CPSF4O95639 269 aaKnown RBP8.96□□□□□ -0.98
NIP7-202ENST00000254941 AIFM1O95831 613 aa8.96□□□□□ -0.98
NIP7-202ENST00000254941 LMNAP02545 664 aaKnown RBP8.96□□□□□ -0.98
NIP7-202ENST00000254941 EFNA1P20827 205 aaPredicted RBP8.96□□□□□ -0.98
NIP7-202ENST00000254941 MLLT3P42568 568 aaPredicted RBP8.96□□□□□ -0.98
NIP7-202ENST00000254941 PCBP4P57723 403 aaKnown RBP8.96□□□□□ -0.98
NIP7-202ENST00000254941 HSD11B2P80365 405 aa8.96□□□□□ -0.98
NIP7-202ENST00000254941 PRTGQ2VWP7 1150 aa8.96□□□□□ -0.98
NIP7-202ENST00000254941 PLA2G2CQ5R387 149 aa8.96□□□□□ -0.98
NIP7-202ENST00000254941 ZC3H14Q6PJT7 736 aaKnown RBP8.96□□□□□ -0.98
NIP7-202ENST00000254941 ZNF621Q6ZSS3 439 aa8.96□□□□□ -0.98
NIP7-202ENST00000254941 USP53Q70EK8 1073 aa8.96□□□□□ -0.98
NIP7-202ENST00000254941 NAT6Q93015 286 aa8.96□□□□□ -0.98
NIP7-202ENST00000254941 STMN2Q93045 179 aa8.96□□□□□ -0.98
NIP7-202ENST00000254941 ZNF583Q96ND8 569 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms