RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PTX3P26022 381 aaPredicted RBP11.98□□□□□ -0.49
VPREB3-201ENST00000248948 SLCO1A2P46721 670 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 SLC26A5P58743 744 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 NAA20P61599 178 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 TLR1Q15399 786 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 ZRSR2Q15696 482 aaKnown RBP11.98□□□□□ -0.49
VPREB3-201ENST00000248948 INAQ16352 499 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 CPSF6Q16630 551 aaKnown RBP eCLIP11.98□□□□□ -0.49
VPREB3-201ENST00000248948 AP5B1Q2VPB7 878 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 FRG2Q64ET8 278 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 H3F3CQ6NXT2 135 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 NUDT13Q86X67 352 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 SIRT6Q8N6T7 355 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 ACOT4Q8N9L9 421 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 MYRIPQ8NFW9 859 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 RGMAQ96B86 450 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 L3HYPDHQ96EM0 354 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 NSUN5Q96P11 429 aaKnown RBP11.98□□□□□ -0.49
VPREB3-201ENST00000248948 CDK15Q96Q40 435 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 TMEM237Q96Q45 408 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 FRG2BQ96QU4 278 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 CSF3RQ99062 836 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 MTERF1Q99551 399 aaKnown RBP11.98□□□□□ -0.49
VPREB3-201ENST00000248948 OR51B5Q9H339 312 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 SEMA4BQ9NPR2 832 aaPredicted RBP11.98□□□□□ -0.49
VPREB3-201ENST00000248948 NECTIN3Q9NQS3 549 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 PRTFDC1Q9NRG1 225 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 MKS1Q9NXB0 559 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 MS4A12Q9NXJ0 267 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 PTGFRNQ9P2B2 879 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 PHF11Q9UIL8 331 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 RNF11Q9Y3C5 154 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 PCDHGA10Q9Y5H3 936 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 FLNCQ14315 2725 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 DYTNA2CJ06 578 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 CYR61O00622 381 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 HNRNPFP52597 415 aaKnown RBP11.97□□□□□ -0.49
VPREB3-201ENST00000248948 PRKAA2P54646 552 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 TAS2R50P59544 299 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 RPS13P62277 151 aaKnown RBP11.97□□□□□ -0.49
VPREB3-201ENST00000248948 BTG2P78543 158 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ACTN3Q08043 901 aaPredicted RBP11.97□□□□□ -0.49
VPREB3-201ENST00000248948 IFT88Q13099 833 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 SLC13A2Q13183 592 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ZNF169Q14929 603 aaPredicted RBP11.97□□□□□ -0.49
VPREB3-201ENST00000248948 CCDC153Q494R4 210 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ZNF678Q5SXM1 525 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ABHD17BQ5VST6 288 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 OR4C11Q6IEV9 310 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 LINC00696Q6ZRV3 163 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 SH2D5Q6ZV89 423 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ATCAYQ86WG3 371 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 MREGQ8N565 214 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 SLC5A8Q8N695 610 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 OR4F6Q8NGB9 312 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 RDH11Q8TC12 318 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 CPT1CQ8TCG5 803 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ZNF382Q96SR6 550 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 SERPINI1Q99574 410 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ZNF717Q9BY31 904 aaPredicted RBP11.97□□□□□ -0.49
VPREB3-201ENST00000248948 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ELOVL6Q9H5J4 265 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ADAP2Q9NPF8 381 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 LYARQ9NX58 379 aaKnown RBP11.97□□□□□ -0.49
VPREB3-201ENST00000248948 KCMF1Q9P0J7 381 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 ABI3Q9P2A4 366 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 MID2Q9UJV3 735 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 EMCNQ9ULC0 261 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 PPIEQ9UNP9 301 aaKnown RBP11.97□□□□□ -0.49
VPREB3-201ENST00000248948 CLDN16Q9Y5I7 305 aa11.97□□□□□ -0.49
VPREB3-201ENST00000248948 A0A1W2PPM1 405 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 SMIM23A6NLE4 172 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 FAM227AF5H4B4 570 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 H3BQF6 201 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 RTCAO00442 366 aaKnown RBP11.96□□□□□ -0.49
VPREB3-201ENST00000248948 DLX3O60479 287 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 SUPT7LO94864 414 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 MLYCDO95822 493 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 TUBBP07437 444 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 IMPDH1P20839 514 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 PPP2R1BP30154 601 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 CRHR1P34998 444 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 CCT5P48643 541 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 MLLT10P55197 1068 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 ARG2P78540 354 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 TNFRSF17Q02223 184 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 CLCQ05315 142 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 ZNF33BQ06732 778 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 LCP2Q13094 533 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 SERTAD2Q14140 314 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 ELAVL1Q15717 326 aaKnown RBP11.96□□□□□ -0.49
VPREB3-201ENST00000248948 COLEC12Q5KU26 742 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 TTC19Q6DKK2 380 aaPredicted RBP11.96□□□□□ -0.49
VPREB3-201ENST00000248948 LETMD1Q6P1Q0 360 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 ZYG11AQ6WRX3 759 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 MILR1Q7Z6M3 343 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 CUZD1Q86UP6 607 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 RNF175Q8N4F7 328 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 TMEM52Q8NDY8 209 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms