RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ZNF521Q96K83 1311 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 FUOMA2VDF0 154 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 GLOD5A6NK44 160 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 ACKR2O00590 384 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 CLN5O75503 358 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 ANXA4P09525 319 aaPredicted RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 TGM1P22735 817 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 FASTKD3Q14CZ7 662 aaKnown RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 FXNQ16595 210 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 PDSS1Q5T2R2 415 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 DBF4BQ8NFT6 615 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 TCEAL2Q9H3H9 227 aaPredicted RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 SCO2O43819 266 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 MPP1Q00013 466 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 TLE1Q04724 770 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 GK2Q14410 553 aaPredicted RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 PIGWQ7Z7B1 504 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 ZNF619Q8N2I2 560 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 NEDD4LQ96PU5 975 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 PORCNQ9H237 461 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 TUBB1Q9H4B7 451 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 TMEM9Q9P0T7 183 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 BAZ2AQ9UIF9 1905 aaKnown RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 CREBL2O60519 120 aaPredicted RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 SHKBP1Q8TBC3 707 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 EBF4Q9BQW3 602 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
MSH6-201ENST00000234420 UFSP2Q9NUQ7 469 aa10.73□□□□□ -0.69
MSH6-201ENST00000234420 SAMD9LQ8IVG5 1584 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 DISP2A7MBM2 1401 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 GLTPD2A6NH11 291 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 ARPC5O15511 151 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 FMO6PO60774 539 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 TGM4P49221 684 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 EPHA4P54764 986 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 UBE2NP61088 152 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 MVKQ03426 396 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 PIGFQ07326 219 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 SPRYD4Q8WW59 207 aaPredicted RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 KLHDC7BQ96G42 594 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 DUSP9Q99956 384 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 KCNH6Q9H252 994 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 RHOJQ9H4E5 214 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 PRDM12Q9H4Q4 367 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 MAGED1Q9Y5V3 778 aaPredicted RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 ZNF860A6NHJ4 632 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 OR7A17O14581 309 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 PIP5K1BO14986 540 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 IL1AP01583 271 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 HLA-DPB1P04440 258 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 GKN3PP0CG01 181 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 CCL11P51671 97 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 PRR5P85299 388 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 PAN3Q58A45 887 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 DCDC5Q6ZRR9 648 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 PPTC7Q8NI37 304 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 TWNKQ96RR1 684 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 SECISBP2Q96T21 854 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 SNRNP25Q9BV90 132 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 PAK1IP1Q9NWT1 392 aaPredicted RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 UNC13BO14795 1591 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 ANKRD33BA6NCL7 494 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 GRID2O43424 1007 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 FGF18O76093 207 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 CDONQ4KMG0 1287 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 TMEM41BQ5BJD5 291 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 LGI4Q8N135 537 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 SCML4Q8N228 414 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 SNAPC3Q92966 411 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 DHX33Q9H6R0 707 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 MGAT4BQ9UQ53 548 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 MYH1P12882 1939 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 SULT1C2O00338 296 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 ALPIP09923 528 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 AGTR1P30556 359 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 LEPRP48357 1165 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 GHRHRQ02643 423 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 DBPQ10586 325 aaPredicted RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 ZBTB2Q8N680 514 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 OR5AK3PQ8NH89 298 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 GLYATL2Q8WU03 294 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 SLC25A44Q96H78 314 aaPredicted RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 NME7Q9Y5B8 376 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 TRIP11Q15643 1979 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 CLASP1Q7Z460 1538 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 LCMT2O60294 686 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 PRKCIP41743 596 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 MAP2K4P45985 399 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 ARRB1P49407 418 aaPredicted RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 BCL2L15Q5TBC7 163 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 PIGZQ86VD9 579 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 ACO2Q99798 780 aaKnown RBP10.72□□□□□ -0.69
MSH6-201ENST00000234420 PLEKHA3Q9HB20 300 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 A0A1W2PPK0 400 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 FAM221BA6H8Z2 402 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 SIGLEC16A6NMB1 481 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 ZDHHC11BP0C7U3 371 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 BMP1P13497 986 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 AOC1P19801 751 aa10.72□□□□□ -0.69
MSH6-201ENST00000234420 C4orf19Q8IY42 314 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms