RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 HKDC1Q2TB90 917 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 MZT2BQ6NZ67 158 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 UBE2R2Q712K3 238 aaPredicted RBP13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 BBS7Q8IWZ6 715 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 ATP6V1C2Q8NEY4 427 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 SUSD3Q96L08 255 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 IFT46Q9NQC8 304 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 ZNF226Q9NYT6 803 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 KLHL21Q9UJP4 597 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 BAIAP2Q9UQB8 552 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 OARD1Q9Y530 152 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 TNS1Q9HBL0 1735 aaKnown RBP13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 DICER1Q9UPY3 1922 aaKnown RBP13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 RALGAPA2Q2PPJ7 1873 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 DRGXA6NNA5 263 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 TRBC1P01850 177 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 CSF3P09919 207 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 ETFAP13804 333 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 CAV3P56539 151 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 ERVK-21P61565 698 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 CHIT1Q13231 466 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 CHRNA6Q15825 494 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 LRIF1Q5T3J3 769 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 SAXO2Q658L1 398 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 CBLL1Q75N03 491 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 FAM124AQ86V42 546 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 STK40Q8N2I9 435 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 SRRQ9GZT4 340 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 MED28Q9H204 178 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 IL17CQ9P0M4 197 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 SLC9A8Q9Y2E8 581 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 AOC2O75106 756 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 HIST1H2AGP0C0S8 130 aaPredicted RBP13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 HIST1H2ADP20671 130 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 APEX1P27695 318 aaKnown RBP13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 MAPKAPK2P49137 400 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 CLCN4P51793 760 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 GPR85P60893 370 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 HNRNPA0Q13151 305 aaKnown RBP13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 C6orf132Q5T0Z8 1188 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 SLC35F1Q5T1Q4 408 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 LIPKQ5VXJ0 399 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 TEX261Q6UWH6 196 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 TRIM46Q7Z4K8 759 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 LINC00518Q8N0U6 118 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 GDPD1Q8N9F7 314 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 ANKRD53Q8N9V6 530 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 LMNTD1Q8N9Z9 388 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 OR9Q1Q8NGQ5 310 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 SGTBQ96EQ0 304 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 MED8Q96G25 268 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 HIST1H2AHQ96KK5 128 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 FAM193BQ96PV7 902 aaPredicted RBP13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 HIST1H2AJQ99878 128 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 WACQ9BTA9 647 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 H2AFJQ9BTM1 129 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 HDHD2Q9H0R4 259 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 GMEB2Q9UKD1 530 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 ERVW-1Q9UQF0 538 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 U3KQ87 197 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 WDR90Q96KV7 1748 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 DOCK4Q8N1I0 1966 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 INMT-MINDY4F8WBC2 141 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 H3BN98 237 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 M0QZQ0 153 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 SAP18O00422 153 aaKnown RBP13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 PRKAR1AP10644 381 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 HLA-EP13747 358 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 ITGA1P56199 1179 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 PER3P56645 1201 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 PAQR6Q6TCH4 344 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 OR8K3Q8NH51 312 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 GTPBP2Q9BX10 602 aaKnown RBP13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 ZFYVE1Q9HBF4 777 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 PAK6Q9NQU5 681 aaPredicted RBP13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 FNIP2Q9P278 1114 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 MAP4K5Q9Y4K4 846 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 ORC5O43913 435 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 HRGP04196 525 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 IL18Q14116 193 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 ANGPT1Q15389 498 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 ZNF852Q6ZMS4 543 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 LUZP2Q86TE4 346 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 LSRQ86X29 649 aaPredicted RBP13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 RBFAQ8N0V3 343 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 FOXJ1Q92949 421 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 NXF2Q9GZY0 626 aaKnown RBP13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 MAGEH1Q9H213 219 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 P2RY12Q9H244 342 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 CD84Q9UIB8 345 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 RAB23Q9ULC3 237 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 HRH3Q9Y5N1 445 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 ZSWIM8A7E2V4 1837 aa13.56□□□□□ -0.24
PCDHB3-201ENST00000231130 ISM1B1AKI9 464 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 CPN2P22792 545 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 CNR2P34972 360 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 TPMTP51580 245 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 IRF8Q02556 426 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 ACSM2AQ08AH3 577 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms