RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ELAVL2Q12926 359 aaKnown RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 C4orf46Q504U0 113 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 IGSF11Q5DX21 431 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 KIAA1841Q6NSI8 718 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 RETSATQ6NUM9 610 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CFAP77Q6ZQR2 320 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 EIF3MQ7L2H7 374 aaKnown RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 DNAJB7Q7Z6W7 309 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 L3MBTL4Q8NA19 623 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 HJURPQ8NCD3 748 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 GPR151Q8TDV0 419 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CHAC2Q8WUX2 184 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 AUTS2Q8WXX7 1259 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 TBC1D20Q96BZ9 403 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 HIST1H2AHQ96KK5 128 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 TM9SF2Q99805 663 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 HIST1H2AJQ99878 128 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 H2AFJQ9BTM1 129 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CDADC1Q9BWV3 514 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CDCP1Q9H5V8 836 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF334Q9HCZ1 680 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 DYRK4Q9NR20 520 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ABCB8Q9NUT2 735 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 MUTYHQ9UIF7 546 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 FZD4Q9ULV1 537 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 DOCK6Q96HP0 2047 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 TMEM202A6NGA9 273 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 GCM2O75603 506 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ICAM2P13598 275 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 PRPS1L1P21108 318 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 KCNJ10P78508 379 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAPQ12884 760 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 DUSP7Q16829 419 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 PROX2Q3B8N5 592 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CCSMST1Q4G0I0 132 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 YIF1BQ5BJH7 314 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAHD1Q6P587 224 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF783Q6ZMS7 281 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 LRRC70Q7Z2Q7 622 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 GPR155Q7Z3F1 870 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 NAGSQ8N159 534 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ANGPTL6Q8NI99 470 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF461Q8TAF7 563 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 OVCA2Q8WZ82 227 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 SCAMP4Q969E2 229 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 FRMD6Q96NE9 622 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CCDC59Q9P031 241 aaKnown RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 STOML2Q9UJZ1 356 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF222Q9UK12 451 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ERVW-1Q9UQF0 538 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 HSPE1-MOB4S4R3N1 261 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CCDC88CQ9P219 2028 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 PABPN1LA6NDY0 278 aaKnown RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 GABRR3A8MPY1 467 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 NRG2O14511 850 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 PCDH7O60245 1069 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 STSP08842 583 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 SDHBP21912 280 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 PRPH2P23942 346 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 TNFSF8P32971 234 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 IRF8Q02556 426 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 GAB1Q13480 694 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 EFR3AQ14156 821 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 IRF3Q14653 427 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 GGTA1PQ4G0N0 100 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ARSKQ6UWY0 536 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF852Q6ZMS4 543 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CCDC149Q6ZUS6 474 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CHMP1BQ7LBR1 199 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 NPAS4Q8IUM7 802 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 CYP4Z2PQ8N1L4 340 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 LMNTD1Q8N9Z9 388 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZBTB44Q8NCP5 570 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 MAGEB10Q96LZ2 347 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 FEVQ99581 238 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 RAD18Q9NS91 495 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 REV1Q9UBZ9 1251 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 RPS6KA6Q9UK32 745 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 A0A1W2PQ45 241 aaPredicted RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 A0A1W2PQY0 241 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 HMX3A6NHT5 357 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 E7EQ34 232 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 GFRA2O00451 464 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLITRK5O94991 958 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 DDOSTP39656 456 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 ITGA1P56199 1179 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 RHAGQ02094 409 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 FGFBP1Q14512 234 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 BAK1Q16611 211 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 GARNL3Q5VVW2 1013 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 LYPLAL1Q5VWZ2 237 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 METTL2BQ6P1Q9 378 aaKnown RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 BBS7Q8IWZ6 715 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 CACTIN-AS1Q8N1I8 211 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 CRIPAKQ8N1N5 446 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SYNPOQ8N3V7 929 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 LILRA3Q8N6C8 439 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms