RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 JPH3Q8WXH2 748 aaPredicted RBP13.2□□□□□ -0.3
NFKB1-201ENST00000226574 TMEM80Q96HE8 168 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 NECTIN4Q96NY8 510 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 RACGAP1Q9H0H5 632 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 SIAEQ9HAT2 523 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 HHLA1C9JL84 531 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 SCN2BO60939 215 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 OAZ2O95190 189 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 ACADMP11310 421 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 CCR7P32248 378 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 CTSOP43234 321 aaPredicted RBP13.2□□□□□ -0.3
NFKB1-201ENST00000226574 MAGEA11P43364 429 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 CRISP1P54107 249 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 CAV3P56539 151 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 SPATS1Q496A3 300 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 NADSYN1Q6IA69 706 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 NCEH1Q6PIU2 408 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 TRPV1Q8NER1 839 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 NCSTNQ92542 709 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 RTP3Q9BQQ7 232 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 GSDMCQ9BYG8 508 aa13.2□□□□□ -0.3
NFKB1-201ENST00000226574 ZFR2Q9UPR6 939 aaKnown RBP13.2□□□□□ -0.3
NFKB1-201ENST00000226574 CD8B2A6NJW9 211 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 C1QTNF3-AMACRE9PGA6 284 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF701M0R085 212 aaPredicted RBP13.19□□□□□ -0.3
NFKB1-201ENST00000226574 WWP2O00308 870 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 CD8BP10966 210 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 HOXD9P28356 352 aaPredicted RBP13.19□□□□□ -0.3
NFKB1-201ENST00000226574 FCHO2Q0JRZ9 810 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 BTBD16Q32M84 506 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 KLHL22Q53GT1 634 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF311Q5JNZ3 666 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 CPZQ66K79 652 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 CRTC1Q6UUV9 634 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 KIAA1324Q6UXG2 1013 aaKnown RBP13.19□□□□□ -0.3
NFKB1-201ENST00000226574 MAPKAP1Q9BPZ7 522 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 MACROD1Q9BQ69 325 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
NFKB1-201ENST00000226574 SMURF1Q9HCE7 757 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 NANSQ9NR45 359 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 ERVK-11Q9UQG0 969 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 OR7A17O14581 309 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 RETP07949 1114 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 DAPP51397 102 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 SGSHP51688 502 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 FKBP1BP68106 108 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 CAP1Q01518 475 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 RHAGQ02094 409 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 FAM46CQ5VWP2 391 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 GTF2IRD2BQ6EKJ0 949 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 RASSF6Q6ZTQ3 369 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 GTF2IRD2Q86UP8 949 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 AMIGO1Q86WK6 493 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 Q8N402 240 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 OR7G3Q8NG95 312 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 LMLNQ96KR4 655 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 PDCD10Q9BUL8 212 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 A0A1W2PQL4 384 aaPredicted RBP13.19□□□□□ -0.3
NFKB1-201ENST00000226574 M0QZQ0 153 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 PCDH17O14917 1159 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 JUPP14923 745 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 ITPKBP27987 946 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 TIA1P31483 386 aaKnown RBP eCLIP13.19□□□□□ -0.3
NFKB1-201ENST00000226574 MAP4K2Q12851 820 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 BCL7AQ4VC05 210 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 MTFR2Q6P444 385 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 LINGO2Q7L985 606 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 CADM3Q8N126 398 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF655Q8N720 491 aaPredicted RBP13.19□□□□□ -0.3
NFKB1-201ENST00000226574 B3GNT7Q8NFL0 401 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 RFKQ969G6 155 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 MAN2B2Q9Y2E5 1009 aa13.19□□□□□ -0.3
NFKB1-201ENST00000226574 ISPDA4D126 451 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF860A6NHJ4 632 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 RPP14O95059 124 aaKnown RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 RASGRP1O95267 797 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 PTX3P26022 381 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 SLC9A3P48764 834 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 TBPL1P62380 186 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 HYAL2Q12891 473 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF630Q2M218 657 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 CTU2Q2VPK5 515 aaKnown RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 UGT3A2Q3SY77 523 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 ZDHHC20Q5W0Z9 365 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 OR6Q1Q8NGQ2 317 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 GPR151Q8TDV0 419 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 TAS2R7Q9NYW3 318 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 HSFX1Q9UBD0 423 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 A0A1B0GW55 424 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 SLC9A3R1O14745 358 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 AQP9O43315 295 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 KLKB1P03952 638 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 INHAP05111 366 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms