RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 MVDP53602 400 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 RPS13P62277 151 aaKnown RBP23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 TFF2Q03403 129 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 INAQ16352 499 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZNF658BQ4V348 819 aaPredicted RBP23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 TOR1AIP1Q5JTV8 583 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 ERAP2Q6P179 960 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 IKBIPQ70UQ0 350 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 GALNT10Q86SR1 603 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 LACC1Q8IV20 430 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 ARRDC3Q96B67 414 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 PPP1R16AQ96I34 528 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 NEURL2Q9BR09 285 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 SGPP1Q9BX95 441 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 SLIRPQ9GZT3 109 aaKnown RBP23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 SLC2A4RGQ9NR83 387 aa23.82■■□□□ 1.4
RUNDC3A-201ENST00000225441 TMEM202A6NGA9 273 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 CLCA1A8K7I4 914 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 C1orf105O95561 183 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 CDK1P06493 297 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 C1GALT1C1LP0DN25 315 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 EPHA2P29317 976 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 PIK3CBP42338 1070 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 HMGA2P52926 109 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 METAP1P53582 386 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 CTSCP53634 463 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 VBP1P61758 197 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 SMN1Q16637 294 aaKnown RBP23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 MICAQ29983 383 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 AHSA2Q719I0 299 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 DNAJC22Q8N4W6 341 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 NATD1Q8N6N6 113 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 OR10G2Q8NGC3 310 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 SPPL2AQ8TCT8 520 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZHX1-C8orf76Q96EF9 292 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 MSANTD3Q96H12 275 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 CRELD1Q96HD1 420 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 SPASTQ9UBP0 616 aa23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 WBP11Q9Y2W2 641 aaKnown RBP23.81■■□□□ 1.4
RUNDC3A-201ENST00000225441 ISPDA4D126 451 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 EFCAB9A8MZ26 197 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 C1QTNF3-AMACRE9PGA6 284 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 H3BM21 787 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZNF8P17098 575 aaPredicted RBP23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 MMP12P39900 470 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 BDKRB1P46663 353 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 TMEM220Q6QAJ8 160 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 TSEN54Q7Z6J9 526 aaKnown RBP23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 MMAAQ8IVH4 418 aaKnown RBP23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 C9orf43Q8TAL5 461 aaPredicted RBP23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 SETD7Q8WTS6 366 aaKnown RBP23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 GEMIN6Q8WXD5 167 aaKnown RBP23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 NEIL2Q969S2 332 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 TAMM41Q96BW9 452 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 RASSF1Q9NS23 344 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 EXO1Q9UQ84 846 aaKnown RBP23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 UNC80Q8N2C7 3258 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 SAGE2PA6NJ88 616 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 TAF4O00268 1085 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 FURINP09958 794 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 CRATP43155 626 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 PPP5CP53041 499 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 OLR1P78380 273 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 SCARB2Q14108 478 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 C2orf27AQ580R0 203 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 LIPIQ6XZB0 460 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZNF765Q7L2R6 523 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZBTB46Q86UZ6 589 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 ARMC8Q8IUR7 673 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 AP2M1Q96CW1 435 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 ERLEC1Q96DZ1 483 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 FEVQ99581 238 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 SLC35A5Q9BS91 424 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 BTBD2Q9BX70 525 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 DMRT3Q9NQL9 472 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 PCDHGA2Q9Y5H1 932 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 PMF1-BGLAPU3KQ54 211 aa23.8■■□□□ 1.4
RUNDC3A-201ENST00000225441 MPZL2O60487 215 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 BMP4P12644 408 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 NTSR1P30989 418 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 PREPP48147 710 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 RPS3AP61247 264 aaKnown RBP23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 EEF1A2Q05639 463 aaKnown RBP23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 DGCR6Q14129 220 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 FAM71E1Q6IPT2 247 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZNF480Q8WV37 535 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 PPCDCQ96CD2 204 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZNF514Q96K75 400 aaPredicted RBP23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 COL21A1Q96P44 957 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 GABRG3Q99928 467 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZNF556Q9HAH1 456 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 C1GALT1Q9NS00 363 aa23.79■■□□□ 1.4
RUNDC3A-201ENST00000225441 KRT87PA6NCN2 255 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 BOLA2-SMG1P6H3BVE0 249 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 PLK4O00444 970 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 ELFN1P0C7U0 828 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 DDX5P17844 614 aaKnown RBP23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 PRIM2P49643 509 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 CBX3Q13185 183 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms