RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TAF4O00268 1085 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 SEC14L5O43304 696 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 DHFRP00374 187 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 DNAJB13P59910 316 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 DUS1LQ6P1R4 473 aaKnown RBP17.73■□□□□ 0.43
CLIP2-201ENST00000223398 JAGN1Q8N5M9 183 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 PNLDC1Q8NA58 520 aaKnown RBP17.73■□□□□ 0.43
CLIP2-201ENST00000223398 HSPA12BQ96MM6 686 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 HERPUD2Q9BSE4 406 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 APOOQ9BUR5 198 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 PIGUQ9H490 435 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 GNG8Q9UK08 70 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 FAM172BPA6NC97 362 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 DNAJB1P25685 340 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 SUOXP51687 545 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF252P-AS1Q0IIN9 211 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 FIGNL1Q6PIW4 674 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 HUS1BQ8NHY5 278 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 SHKBP1Q8TBC3 707 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 OMA1Q96E52 524 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 WBP11Q9Y2W2 641 aaKnown RBP17.72■□□□□ 0.43
CLIP2-201ENST00000223398 TOPAZ1Q8N9V7 1692 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 PDCD5O14737 125 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 SLC9A3P48764 834 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 OR4D1Q15615 310 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 SLC36A4Q6YBV0 504 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 LRRC25Q8N386 305 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-201ENST00000223398 DGCR14Q96DF8 476 aaKnown RBP17.72■□□□□ 0.43
CLIP2-201ENST00000223398 ORAI3Q9BRQ5 295 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 DNMT3BQ9UBC3 853 aaKnown RBP17.72■□□□□ 0.43
CLIP2-201ENST00000223398 CHD4Q14839 1912 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 A6NL46 340 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 NPIPA2E9PIF3 369 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 NPIPA3F8WFD2 350 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 TOR1BO14657 336 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 APBB3O95704 486 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 SLC35E2BP0CK96 405 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 FGF3P11487 239 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-201ENST00000223398 E2F2Q14209 437 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 ARMC10Q8N2F6 343 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 C1orf216Q8TAB5 229 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 MATN2O00339 956 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 ADAM8P78325 824 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 MERTKQ12866 999 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 CARTPTQ16568 116 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 UNC50Q53HI1 259 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 G6PC3Q9BUM1 346 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 POLDIP3Q9BY77 421 aaKnown RBP17.72■□□□□ 0.43
CLIP2-201ENST00000223398 OR51I1Q9H343 314 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 CXorf21Q9HAI6 301 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 GPN1Q9HCN4 374 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-201ENST00000223398 MYH1P12882 1939 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 OR3A3P47888 321 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 OR3A2P47893 321 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 RNF220Q5VTB9 566 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 OR4C11Q6IEV9 310 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 OR5P2Q8WZ92 322 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 TMED9Q9BVK6 235 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 WDR12Q9GZL7 423 aaKnown RBP17.72■□□□□ 0.43
CLIP2-201ENST00000223398 KCNK13Q9HB14 408 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 NLGN3Q9NZ94 848 aa17.72■□□□□ 0.43
CLIP2-201ENST00000223398 E7EQ34 232 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF670-ZNF695F2Z2N8 137 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 CSTBP04080 98 aaKnown RBP17.71■□□□□ 0.43
CLIP2-201ENST00000223398 PGAM2P15259 253 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 CASP6P55212 293 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 LRP8Q14114 963 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 TMEM31Q5JXX7 168 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 QSOX2Q6ZRP7 698 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 C7orf57Q8NEG2 295 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 TNFAIP8L1Q8WVP5 186 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 PEX13Q92968 403 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 STRA6Q9BX79 667 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 SCML1Q9UN30 329 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 NFS1Q9Y697 457 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 PRAMEF26H0Y7S4 382 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 RPLP0P05388 317 aaKnown RBP17.71■□□□□ 0.43
CLIP2-201ENST00000223398 NR2C1P13056 603 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 PSMD7P51665 324 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 OR2B6P58173 313 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 SRYQ05066 204 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 TIGD6Q17RP2 521 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 TPRG1LQ5T0D9 272 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 FAM43BQ6ZT52 329 aaPredicted RBP17.71■□□□□ 0.43
CLIP2-201ENST00000223398 CDH24Q86UP0 819 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 PDPRQ8NCN5 879 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 OR52B6Q8NGF0 335 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 B4GALT7Q9UBV7 327 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 CA5BQ9Y2D0 317 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 C1orf226A1L170 272 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 ITGA5P08648 1049 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 PDHA2P29803 388 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 GRM7Q14831 915 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 HNRNPA1L2Q32P51 320 aaKnown RBP17.71■□□□□ 0.43
CLIP2-201ENST00000223398 FAM78AQ5JUQ0 283 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 RBM48Q5RL73 367 aaKnown RBP17.71■□□□□ 0.43
CLIP2-201ENST00000223398 TMEFF1Q8IYR6 380 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF611Q8N823 705 aa17.71■□□□□ 0.43
CLIP2-201ENST00000223398 STARD5Q9NSY2 213 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms