RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ATP6AP1Q15904 470 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 DNM1P34Q6PK57 102 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 GKN2Q86XP6 184 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 OR5T3Q8NGG3 340 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 FIBINQ8TAL6 211 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 ZFAND2BQ8WV99 257 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 IFT46Q9NQC8 304 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 NLGN3Q9NZ94 848 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 GMEB2Q9UKD1 530 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 TBC1D24Q9ULP9 559 aa11.07□□□□□ -0.64
NOD1-201ENST00000222823 MID1O15344 667 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 XPNPEP2O43895 674 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 SLC2A2P11168 524 aaPredicted RBP11.06□□□□□ -0.64
NOD1-201ENST00000222823 CD9P21926 228 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 SLC15A1P46059 708 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 SLC3A1Q07837 685 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 SWI5Q1ZZU3 235 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.06□□□□□ -0.64
NOD1-201ENST00000222823 SLC35F1Q5T1Q4 408 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 PGBD2Q6P3X8 592 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 TSPAN33Q86UF1 283 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 CARM1Q86X55 608 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 KDM1BQ8NB78 822 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 ZNF689Q96CS4 500 aaPredicted RBP11.06□□□□□ -0.64
NOD1-201ENST00000222823 WDR92Q96MX6 357 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 BLOC1S5-TXNDC5H3BN57 136 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 AHSA1O95433 338 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 KLF8O95600 359 aaPredicted RBP11.06□□□□□ -0.64
NOD1-201ENST00000222823 EDNRAP25101 427 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 CD70P32970 193 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 GJA5P36382 358 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 OR3A3P47888 321 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 OR3A2P47893 321 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 CLDN8P56748 225 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 RPS3AP61247 264 aaKnown RBP11.06□□□□□ -0.64
NOD1-201ENST00000222823 GINS1Q14691 196 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 PUS10Q3MIT2 529 aaKnown RBP11.06□□□□□ -0.64
NOD1-201ENST00000222823 ZNF404Q494X3 552 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 CYP27C1Q4G0S4 372 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 PHF19Q5T6S3 580 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 RASGRP3Q8IV61 690 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 LNX2Q8N448 690 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 PNPLA1Q8N8W4 532 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 ANKLE1Q8NAG6 615 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 NR4A3Q92570 626 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 FUBP1Q96AE4 644 aaKnown RBP11.06□□□□□ -0.64
NOD1-201ENST00000222823 DPH7Q9BTV6 452 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 SEC61A2Q9H9S3 476 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 RC3H2Q9HBD1 1191 aaKnown RBP11.06□□□□□ -0.64
NOD1-201ENST00000222823 TMEM5Q9Y2B1 443 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 EVPLQ92817 2033 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 TGM5O43548 720 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 PRSS56P0CW18 603 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 HRH2P25021 359 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 HOXC12P31275 282 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 VIPR2P41587 438 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 TUBA3CQ13748 450 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 ARFRP1Q13795 201 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 DEFB134Q4QY38 66 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 MORN1Q5T089 497 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 ASB18Q6ZVZ8 466 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 CCDC36Q8IYA8 594 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 NT5C3BQ969T7 300 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 F2RL3Q96RI0 385 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 DOHHQ9BU89 302 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 SLC22A4Q9H015 551 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 SOX17Q9H6I2 414 aaPredicted RBP11.06□□□□□ -0.64
NOD1-201ENST00000222823 RNF6Q9Y252 685 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 USP3Q9Y6I4 520 aa11.06□□□□□ -0.64
NOD1-201ENST00000222823 KHNYNO15037 678 aaKnown RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 ENTPD6O75354 484 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 CD72P21854 359 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 OR4D2P58180 307 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.05□□□□□ -0.64
NOD1-201ENST00000222823 NRROSQ86YC3 692 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 HDAC2Q92769 488 aaKnown RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 OSTF1Q92882 214 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 FAM129BQ96TA1 746 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 TMED9Q9BVK6 235 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 HERC2P3Q9BVR0 1158 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 BOCQ9BWV1 1114 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 CST11Q9H112 138 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 ACTL8Q9H568 366 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 BRWD1Q9NSI6 2320 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 MYO10Q9HD67 2058 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 C2orf92A0A1B0GVN3 265 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 IGLON5A6NGN9 336 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 H0YAE9 185 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 TNFRSF10BO14763 440 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 AURKAO14965 403 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 EEDO75530 441 aaKnown RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 CDRT1O95170 752 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 OR12D1P0DN82 309 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 GRIA2P42262 883 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 VBP1P61758 197 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 GALNT1Q10472 559 aaPredicted RBP11.05□□□□□ -0.64
NOD1-201ENST00000222823 ZNF789Q5FWF6 425 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 CLLU1OSQ5K130 101 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 C6orf141Q5SZD1 244 aa11.05□□□□□ -0.64
NOD1-201ENST00000222823 OGFRL1Q5TC84 451 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms