RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ALDOCP09972 364 aaKnown RBP25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 CCNYL3P0C7X3 344 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 BCKDHAP12694 445 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 SDC1P18827 310 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 DIO3P55073 304 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 ZNF763Q0D2J5 394 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 MRM1Q6IN84 353 aaKnown RBP25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 OGFOD2Q6N063 350 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 GPR180Q86V85 440 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 LIX1Q8N485 282 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 FAM47BQ8NA70 645 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 CLHC1Q8NHS4 586 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 CCDC28BQ9BUN5 200 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 LYRM4Q9HD34 91 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 TEX10Q9NXF1 929 aaPredicted RBP25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 BAIAP2L1Q9UHR4 511 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 PADI1Q9ULC6 663 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 ATG4BQ9Y4P1 393 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 ASB4Q9Y574 426 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 RAD1O60671 282 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 PIM1P11309 404 aaPredicted RBP25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 XCR1P46094 333 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 TAS2R50P59544 299 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 SMU1Q2TAY7 513 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 MLIPQ5VWP3 458 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 NLGN4XQ8N0W4 816 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 ESX1Q8N693 406 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 NLGN4YQ8NFZ3 816 aaPredicted RBP25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 C16orf78Q8WTQ4 265 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 C10orf82Q8WW14 230 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 TSSK3Q96PN8 268 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 CSF3RQ99062 836 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 KCMF1Q9P0J7 381 aa25.74■■□□□ 1.71
CHMP4B-201ENST00000217402 SRRM3A6NNA2 597 aaPredicted RBP25.73■■□□□ 1.71
CHMP4B-201ENST00000217402 RNH1P13489 461 aaKnown RBP25.73■■□□□ 1.71
CHMP4B-201ENST00000217402 CD82P27701 267 aa25.73■■□□□ 1.71
CHMP4B-201ENST00000217402 RAB38P57729 211 aa25.73■■□□□ 1.71
CHMP4B-201ENST00000217402 SPATA19Q7Z5L4 167 aa25.73■■□□□ 1.71
CHMP4B-201ENST00000217402 CCT8L2Q96SF2 557 aa25.73■■□□□ 1.71
CHMP4B-201ENST00000217402 CLK4Q9HAZ1 481 aaKnown RBP25.73■■□□□ 1.71
CHMP4B-201ENST00000217402 PHF11Q9UIL8 331 aa25.73■■□□□ 1.71
CHMP4B-201ENST00000217402 FAM227AF5H4B4 570 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 PSMD12O00232 456 aaPredicted RBP25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 UBDO15205 165 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 PRKRAO75569 313 aaKnown RBP25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 IL3P08700 152 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 G6PDP11413 515 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 CPN2P22792 545 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 ERV3-1Q14264 604 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 PTGR1Q14914 329 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 FAM198BQ6UWH4 519 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 ZNF517Q6ZMY9 492 aaPredicted RBP25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 STON2Q8WXE9 905 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 TM4SF18Q96CE8 201 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 EGLN2Q96KS0 407 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 CATSPER2Q96P56 530 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 ZNF282Q9UDV7 671 aaPredicted RBP25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 GPN3Q9UHW5 284 aaPredicted RBP25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 SPACA6W5XKT8 324 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 AKAP13Q12802 2813 aa25.72■■□□□ 1.71
CHMP4B-201ENST00000217402 A0A1W2PR48 441 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 C9J4A7 227 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 SNX3O60493 162 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 JRKO75564 520 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 CDC123O75794 336 aaPredicted RBP25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 ACPPP15309 386 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 FOXL2P58012 376 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 MAP7Q14244 749 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 VWA2Q5GFL6 755 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 C18orf63Q68DL7 685 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 PRSS58Q8IYP2 241 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 MMP21Q8N119 569 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 SLC45A3Q96JT2 553 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 ZNF578Q96N58 590 aaPredicted RBP25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 MKKSQ9NPJ1 570 aaPredicted RBP25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 ASIC5Q9NY37 505 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 SEC16AO15027 2179 aa25.71■■□□□ 1.71
CHMP4B-201ENST00000217402 AIFM1O95831 613 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 ONECUT2O95948 504 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 PRPS2P11908 318 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 TRA2BP62995 288 aaKnown RBP25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 TNFRSF17Q02223 184 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 TBC1D25Q3MII6 688 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 NDUFAF5Q5TEU4 345 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 SHISA6Q6ZSJ9 500 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 OVCH1Q7RTY7 1134 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 ZC3H7AQ8IWR0 971 aaKnown RBP25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 CACNA2D3Q8IZS8 1091 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 TMEM132CQ8N3T6 1108 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 CT55Q8WUE5 264 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 GFM2Q969S9 779 aaKnown RBP25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 TBC1D20Q96BZ9 403 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 AIG1Q9NVV5 245 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 WDR70Q9NW82 654 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 ACSL6Q9UKU0 697 aa25.7■■□□□ 1.71
CHMP4B-201ENST00000217402 GLOD5A6NK44 160 aa25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 PROM1O43490 865 aa25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 LRATO95237 230 aa25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 FAM107AO95990 144 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms