RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TMEM52Q8NDY8 209 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 B3GNT7Q8NFL0 401 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 TTLQ8NG68 377 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 TMEM125Q96AQ2 219 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 DERL2Q9GZP9 239 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 TRIM45Q9H8W5 580 aaPredicted RBP14□□□□□ -0.17
UPK3A-201ENST00000216211 CHST11Q9NPF2 352 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 PRTFDC1Q9NRG1 225 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 FBXW2Q9UKT8 454 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 PKDREJQ9NTG1 2253 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 LRIT2A6NDA9 550 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 CXorf49A8MYA2 514 aaPredicted RBP13.99□□□□□ -0.17
UPK3A-201ENST00000216211 TGFBR3LH3BV60 316 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 RIPK2O43353 540 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 WISP3O95389 354 aaPredicted RBP13.99□□□□□ -0.17
UPK3A-201ENST00000216211 COX6B1P14854 86 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 SSTR1P30872 391 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 RFC3P40938 356 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 MEOX1P50221 254 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 SMSP52788 366 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 PLA2G16P53816 162 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 RAB38P57729 211 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 POU4F1Q01851 419 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 ADNP2Q6IQ32 1131 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 VN1R5Q7Z5H4 357 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 CHERPQ8IWX8 916 aaKnown RBP13.99□□□□□ -0.17
UPK3A-201ENST00000216211 SCUBE1Q8IWY4 988 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 KRT78Q8N1N4 520 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 ARMC10Q8N2F6 343 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 GOLGA6L1Q8N7Z2 621 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 FAM47BQ8NA70 645 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 AGAP11Q8TF27 550 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 NCLNQ969V3 563 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 ESAMQ96AP7 390 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 QRFPRQ96P65 431 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 PHF12Q96QT6 1004 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 TMEM109Q9BVC6 243 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 NPLQ9BXD5 320 aaPredicted RBP13.99□□□□□ -0.17
UPK3A-201ENST00000216211 WWOXQ9NZC7 414 aa13.99□□□□□ -0.17
UPK3A-201ENST00000216211 ZNF223Q9UK11 482 aaPredicted RBP13.99□□□□□ -0.17
UPK3A-201ENST00000216211 OTOGQ6ZRI0 2925 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 ANKDD1BA6NHY2 528 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 C19orf84I3L1E1 186 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CLGNO14967 610 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 EIF3HO15372 352 aaKnown RBP eCLIP13.98□□□□□ -0.17
UPK3A-201ENST00000216211 PHGDHO43175 533 aaKnown RBP13.98□□□□□ -0.17
UPK3A-201ENST00000216211 B3GALT2O43825 422 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 PRKNO60260 465 aaPredicted RBP13.98□□□□□ -0.17
UPK3A-201ENST00000216211 PRAMEF4O60810 478 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CLEC3AO75596 197 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CLDN14O95500 239 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 TBX6O95947 436 aaPredicted RBP13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CCDC166P0CW27 439 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 AGAP20933 346 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 PTGER1P34995 402 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 HSPA7P48741 367 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 HSD17B7P56937 341 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 ZNF844Q08AG5 666 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 SLC13A2Q13183 592 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 PRAMEF9Q5VWM5 478 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 TRIM40Q6P9F5 258 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 C3P1Q6ZMU1 363 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 FGD2Q7Z6J4 655 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CLNKQ7Z7G1 428 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CROCCP2Q86T23 111 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CCDC25Q86WR0 208 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 DOLPP1Q86YN1 238 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 GPSM1Q86YR5 675 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 SULF2Q8IWU5 870 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CYP4Z2PQ8N1L4 340 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 TMEM156Q8N614 296 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 SNX31Q8N9S9 440 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 PYROXD1Q8WU10 500 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 VMP1Q96GC9 406 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 REXO4Q9GZR2 422 aaKnown RBP13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CDC42EP4Q9H3Q1 356 aaKnown RBP13.98□□□□□ -0.17
UPK3A-201ENST00000216211 NT5DC2Q9H857 520 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 LIN28AQ9H9Z2 209 aaKnown RBP13.98□□□□□ -0.17
UPK3A-201ENST00000216211 TMBIM4Q9HC24 238 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 SAYSD1Q9NPB0 183 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 DNAJC11Q9NVH1 559 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 GPRC5BQ9NZH0 403 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 KLF13Q9Y2Y9 288 aaPredicted RBP13.98□□□□□ -0.17
UPK3A-201ENST00000216211 ASB1Q9Y576 335 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 CLDN16Q9Y5I7 305 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 TACC2O95359 2948 aa13.98□□□□□ -0.17
UPK3A-201ENST00000216211 A0A088AWK7 358 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 MYOCOSA0A1B0GUC4 107 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 KLRC4-KLRK1H3BQV0 150 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 CLDN4O14493 209 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 TFECO14948 347 aaPredicted RBP13.97□□□□□ -0.17
UPK3A-201ENST00000216211 PEX1O43933 1283 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 ITGA10O75578 1167 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 CD1DP15813 335 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 ZNF10P21506 573 aaPredicted RBP13.97□□□□□ -0.17
UPK3A-201ENST00000216211 CERS1P27544 350 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 PTGER4P35408 488 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 GGT5P36269 586 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 MAGEA4P43358 317 aa13.97□□□□□ -0.17
UPK3A-201ENST00000216211 GPR143P51810 404 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms