RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SEC14L1Q92503 715 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 HSPBAP1Q96EW2 488 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 RHCGQ9UBD6 479 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 GMEB2Q9UKD1 530 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 FAM72CH0Y354 149 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 S1PR4O95977 384 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 TYRP1P17643 537 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 GNG2P59768 71 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 RPS21P63220 83 aaKnown RBP13.05□□□□□ -0.32
SF3A1-201ENST00000215793 ST3GAL4Q11206 333 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 FAM72AQ5TYM5 149 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 FAM72DQ6L9T8 149 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 DPY19L3Q6ZPD9 716 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 TAS1R3Q7RTX0 852 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 FAM72BQ86X60 149 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 CREB3L1Q96BA8 519 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 MUS81Q96NY9 551 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 FCRL3Q96P31 734 aaPredicted RBP13.05□□□□□ -0.32
SF3A1-201ENST00000215793 HERC2P3Q9BVR0 1158 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 MEAF6Q9HAF1 191 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 AIG1Q9NVV5 245 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 BCKDHAP12694 445 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 POLR2CP19387 275 aaPredicted RBP13.05□□□□□ -0.32
SF3A1-201ENST00000215793 ACRV1P26436 265 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 KCNC1P48547 511 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 SLC35F1Q5T1Q4 408 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 TMED4Q7Z7H5 227 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 SERINC5Q86VE9 423 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 FANK1Q8TC84 345 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 C16orf70Q9BSU1 422 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 POLDIP3Q9BY77 421 aaKnown RBP13.05□□□□□ -0.32
SF3A1-201ENST00000215793 GLOD5A6NK44 160 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 A8MU76 341 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 LRRN3E7EW58 273 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 GKP32189 559 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 MAGEA12P43365 314 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 ACTC1P68032 377 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 ACTA1P68133 377 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 LAPTM4AQ15012 233 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 XKR5Q6UX68 686 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 CCDC116Q8IYX3 515 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 OR2T33Q8NG76 320 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 MAPK15Q8TD08 544 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 TMEM41AQ96HV5 264 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 PCYT2Q99447 389 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 DUOX1Q9NRD9 1551 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 A0A1B0GVC2 190 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 SLC19A2O60779 497 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 PPM1BO75688 479 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 LATS1O95835 1130 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 SLC35E2BP0CK96 405 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 JUPP14923 745 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 S1PR1P21453 382 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 ETV3P41162 512 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 OR1E2P47887 323 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 E2F1Q01094 437 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 GSTM4Q03013 218 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 EIF4HQ15056 248 aaKnown RBP13.05□□□□□ -0.32
SF3A1-201ENST00000215793 GLT8D1Q68CQ7 371 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 DLK2Q6UY11 383 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 TRIM74Q86UV6 250 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 OR51G2Q8NGK0 314 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 OR8J1Q8NGP2 316 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 PIP5K1AQ99755 562 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 PRTFDC1Q9NRG1 225 aa13.05□□□□□ -0.32
SF3A1-201ENST00000215793 PAK4O96013 591 aaPredicted RBP13.04□□□□□ -0.32
SF3A1-201ENST00000215793 MEF2AQ02078 507 aaPredicted RBP13.04□□□□□ -0.32
SF3A1-201ENST00000215793 UNC50Q53HI1 259 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 SPIN3Q5JUX0 258 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 C1orf189Q5VU69 101 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF280BQ86YH2 543 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 MINDY1Q8N5J2 469 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
SF3A1-201ENST00000215793 TMEM125Q96AQ2 219 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 SLC7A6OSQ96CW6 309 aaPredicted RBP13.04□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF717Q9BY31 904 aaPredicted RBP13.04□□□□□ -0.32
SF3A1-201ENST00000215793 MVB12BQ9H7P6 319 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 HPF1Q9NWY4 346 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 A0A1B0GVT2 93 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 ATP6V1G1O75348 118 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 GJB5O95377 273 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 FHP07954 510 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 CELP19835 753 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 CD9P21926 228 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 EIF1AXP47813 144 aaKnown RBP13.04□□□□□ -0.32
SF3A1-201ENST00000215793 GJA8P48165 433 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 IST1P53990 364 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 LMAN2Q12907 356 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 MOGSQ13724 837 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 ELOCQ15369 112 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 C6orf141Q5SZD1 244 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 LRIF1Q5T3J3 769 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 ASPGQ86U10 573 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 KCNN1Q92952 543 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 RFT1Q96AA3 541 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 ZC3H10Q96K80 434 aaKnown RBP13.04□□□□□ -0.32
SF3A1-201ENST00000215793 PELOQ9BRX2 385 aaKnown RBP13.04□□□□□ -0.32
SF3A1-201ENST00000215793 HHATLQ9HCP6 504 aa13.04□□□□□ -0.32
SF3A1-201ENST00000215793 ASB6Q9NWX5 421 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms