RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PNPLA3Q9NST1 481 aa13.61□□□□□ -0.23
RTFDC1-201ENST00000023939 TEX10Q9NXF1 929 aaPredicted RBP13.61□□□□□ -0.23
RTFDC1-201ENST00000023939 UTS2RQ9UKP6 389 aa13.61□□□□□ -0.23
RTFDC1-201ENST00000023939 G3V2T6 193 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 SOX1O00570 391 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 ERI3O43414 337 aaKnown RBP13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 VIPP01282 170 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 SERPIND1P05546 499 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 CHI3L1P36222 383 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 CAPGP40121 348 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 CRATP43155 626 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 MAGEA8P43361 318 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 CRYBA2P53672 197 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 GPR18Q14330 331 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 TOR1AIP1Q5JTV8 583 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 COX20Q5RI15 118 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 ZDHHC21Q8IVQ6 265 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 TRIM48Q8IWZ4 208 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 RBM12BQ8IXT5 1001 aaKnown RBP13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 GJD3Q8N144 294 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 AMER3Q8N944 861 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 ACOT4Q8N9L9 421 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 OR5K1Q8NHB7 308 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 MAGEE2Q8TD90 523 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 SDCCAG3Q96C92 435 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 KLHDC7BQ96G42 594 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 SHDQ96IW2 340 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 CXorf36Q9H7Y0 433 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 ADPRHL2Q9NX46 363 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 ZSCAN32Q9NX65 697 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 CPNE7Q9UBL6 633 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 ASB4Q9Y574 426 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 PCDHGB5Q9Y5G0 923 aa13.6□□□□□ -0.23
RTFDC1-201ENST00000023939 C4orf51C9J302 202 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 PPM1DO15297 605 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ZW10O43264 779 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 NOBOXO60393 691 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 GCM2O75603 506 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ZNF682O95780 498 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 SMIM18P0DKX4 95 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ETFAP13804 333 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 UGT2B7P16662 529 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 DCTP40126 519 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 MANFP55145 182 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ADARB1P78563 741 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 PPP2R2BQ00005 443 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 PLCL1Q15111 1095 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 CYBRD1Q53TN4 286 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 TJAP1Q5JTD0 557 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 NDUFAF5Q5TEU4 345 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 USP51Q70EK9 711 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 VN1R4Q7Z5H5 301 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 PARGQ86W56 976 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 RNF130Q86XS8 419 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 HIPK1Q86Z02 1210 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 DHRSXQ8N5I4 330 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 PJA1Q8NG27 643 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 GAL3ST3Q96A11 431 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 TM4SF19Q96DZ7 209 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ABCG4Q9H172 646 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 TCEAL2Q9H3H9 227 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 SYNPO2LQ9H987 977 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 TM9SF3Q9HD45 589 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ACTR10Q9NZ32 417 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 RAPGEFL1Q9UHV5 662 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 COLQQ9Y215 455 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 TRBV23OR9-2A0A075B6M9 112 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 KRBA1A5PL33 1030 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 METTL12A8MUP2 240 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 TMEM229AB2RXF0 380 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 GNGT2O14610 69 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 VILLO15195 856 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ARAFP10398 606 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 CD27P26842 260 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 RXRGP48443 463 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ALDH9A1P49189 494 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 RGS1Q08116 209 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 EPS8Q12929 822 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 SLAMF1Q13291 335 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 IQCCQ4KMZ1 466 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 FBXO42Q6P3S6 717 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ASPGQ86U10 573 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 STK32CQ86UX6 486 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 IQCHQ86VS3 1027 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 CADM4Q8NFZ8 388 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 ZFP28Q8NHY6 868 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 MAL2Q969L2 176 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 HSH2DQ96JZ2 352 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 OR2A5Q96R48 311 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 RBM4BQ9BQ04 359 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 RBM4Q9BWF3 364 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 FAM192AQ9GZU8 254 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 GABARAPL1Q9H0R8 117 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 SLC35C2Q9NQQ7 365 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 SIRT3Q9NTG7 399 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 LYARQ9NX58 379 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 IFT80Q9P2H3 777 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 APOBEC3BQ9UH17 382 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 PILRAQ9UKJ1 303 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms