RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ASZ1Q8WWH4 475 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 SCLYQ96I15 445 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 LYSMD1Q96S90 227 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 WRAP53Q9BUR4 548 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 RIOK2Q9BVS4 552 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 PRRG3Q9BZD7 231 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 SPNS1Q9H2V7 528 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 RNF186Q9NXI6 227 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 V9GYH0 126 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 ANAPC1Q9H1A4 1944 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 ZAR1LA6NP61 321 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 FADS2P1A8MWK0 482 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 RNASET2O00584 256 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 PLD2O14939 933 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 CSO75390 466 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 KLHL18O94889 574 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 KLK1P06870 262 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 PPIBP23284 216 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 NDUFA5Q16718 116 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 SYTL3Q4VX76 610 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 LIPKQ5VXJ0 399 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 ASTLQ6HA08 431 aaPredicted RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 OR52N2Q8NGI0 321 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 FYTTD1Q96QD9 318 aaKnown RBP13.41□□□□□ -0.26
USH1C-201ENST00000005226 NRTNQ99748 197 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 TAPBPLQ9BX59 468 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 REEP4Q9H6H4 257 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 KLHL42Q9P2K6 505 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 CORO2BQ9UQ03 480 aa13.41□□□□□ -0.26
USH1C-201ENST00000005226 HELZP42694 1942 aaKnown RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 ALPK3Q96L96 1907 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 GOLGA4Q13439 2230 aaKnown RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 H3BN98 237 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 CAPN5O15484 640 aaPredicted RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 TPST2O60704 377 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 SEMA7AO75326 666 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 SNX4O95219 450 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 CYP17A1P05093 508 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 HLA-FP30511 346 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 ETV6P41212 452 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 EEF1A2Q05639 463 aaKnown RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 VEPH1Q14D04 833 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 TNFAIP8L2Q6P589 184 aaPredicted RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 C22orf39Q6P5X5 142 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 TMIGD1Q6UXZ0 262 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 TMPRSS11AQ6ZMR5 421 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 OLIG3Q7RTU3 272 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 MEX3DQ86XN8 651 aaKnown RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.4□□□□□ -0.26
USH1C-201ENST00000005226 TRIM48Q8IWZ4 208 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 TMEM246Q9BRR3 403 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 FAM83DQ9H4H8 585 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 PAQR5Q9NXK6 330 aaPredicted RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 NUFIP1Q9UHK0 495 aaKnown RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 KLHL20Q9Y2M5 609 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 YARS2Q9Y2Z4 477 aaKnown RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 SNX11Q9Y5W9 270 aa13.4□□□□□ -0.26
USH1C-201ENST00000005226 DNMT3AQ9Y6K1 912 aaPredicted RBP13.4□□□□□ -0.26
USH1C-201ENST00000005226 TLR4O00206 839 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 RGS13O14921 159 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 SLC16A5O15375 505 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 ABLIM3O94929 683 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 HBQ1P09105 142 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 IL7P13232 177 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 CD72P21854 359 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 HNF4AP41235 474 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 CRYBB2P43320 205 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 MAPK8P45983 427 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 LIMS1P48059 325 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.27
USH1C-201ENST00000005226 SP140Q13342 867 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 KRR1Q13601 381 aaKnown RBP13.4□□□□□ -0.27
USH1C-201ENST00000005226 RAB43Q86YS6 212 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 RAB8BQ92930 207 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 PPCDCQ96CD2 204 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 ECHDC3Q96DC8 303 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 PHOX2BQ99453 314 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 SPATA9Q9BWV2 254 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 DYRK4Q9NR20 520 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 CRNNQ9UBG3 495 aaPredicted RBP13.4□□□□□ -0.27
USH1C-201ENST00000005226 ENPP4Q9Y6X5 453 aa13.4□□□□□ -0.27
USH1C-201ENST00000005226 MN1Q10571 1320 aaPredicted RBP13.39□□□□□ -0.27
USH1C-201ENST00000005226 MEIOCA2RUB1 952 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 CENPXA8MT69 81 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 CDRT1O95170 752 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 SELPP16109 830 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 TIE1P35590 1138 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 SLBPQ14493 270 aaKnown RBP eCLIP13.39□□□□□ -0.27
USH1C-201ENST00000005226 SPHARQ15513 63 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 Q5BKY6 102 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 SNAP47Q5SQN1 464 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 SLCO4C1Q6ZQN7 724 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 ABI3BPQ7Z7G0 1075 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 NLRP8Q86W28 1048 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 GALNT12Q8IXK2 581 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 TCEANCQ8N8B7 351 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 RASGEF1AQ8N9B8 481 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 ST13P5Q8NFI4 369 aaPredicted RBP13.39□□□□□ -0.27
USH1C-201ENST00000005226 CHAC2Q8WUX2 184 aa13.39□□□□□ -0.27
USH1C-201ENST00000005226 GEMIN6Q8WXD5 167 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms