RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Clca3a1Q9QX15 902 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Zfp981A2A8V7 445 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Mgl2A9XX86 381 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Gm7951E9Q0A2 213 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Gm6482F6YHC1 213 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Gm17124F6ZIG1 213 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Gm21833J3QPK1 500 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Vmn2r97K7N6Z2 861 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Igfbp1P47876 272 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Tatdn1Q6P8M1 295 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Bri3bpQ8BXV2 253 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Calhm4Q8CE93 315 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Rad51cQ924H5 366 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 9030624G23RikQ9D308 155 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Olfr1215A3KGY3 312 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Gm10720D3Z1I5 223 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Olfr618K7N6B3 318 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Ackr2O08707 378 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Ccr5P51682 354 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Hcrtr1P58307 416 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Nol9Q3TZX8 714 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Macrod2Q3UYG8 475 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Fam71f1Q3UZD7 341 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Foxd3Q61060 465 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Tm9sf4Q8BH24 643 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 PxkQ8BX57 582 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Olfr622Q8VGY7 317 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Mrpl21Q9D1N9 209 aaKnown RBP13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Med27Q9DB40 311 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Tgm7A2ART8 616 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 ChadlE9Q7T7 748 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Gm14496K7N5U4 849 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Dnajb5O89114 348 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Nell1Q2VWQ2 810 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Clec2eQ80XD9 204 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Eif1axQ8BMJ3 144 aaKnown RBP13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Aifm2Q8BUE4 373 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Med28Q920D3 178 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Spatc1lQ9D9W0 342 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Cntnap1O54991 1385 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Nup153E9Q3G8 1462 aaKnown RBP13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Tubg1P83887 451 aaKnown RBP13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Adra1bP97717 514 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Elf3Q3UPW2 391 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Fads6Q80UG1 342 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 E330021D16RikQ8BW45 371 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 St3gal4Q91Y74 333 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 AllcQ9JHX6 414 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Slc29a1Q9JIM1 460 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Sec61a2Q9JLR1 476 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Ptpn23Q6PB44 1692 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Tceal7A3KGA4 98 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Tomm5B1AXP6 51 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Znf683I7HJS4 458 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Socs2O35717 198 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Cd163Q2VLH6 1121 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Nlrc3Q5DU56 1064 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Zdhhc18Q5Y5T2 380 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Dnajc15Q78YY6 149 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Nlgn3Q8BYM5 825 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 ApofQ91V80 315 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Mrps5Q99N87 432 aaKnown RBP13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 DenrQ9CQJ6 198 aaKnown RBP13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Uba7Q9DBK7 977 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 CasrQ9QY96 1079 aa13.51□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Gm12394A2AKP6 982 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Vmn1r76F8VQ63 324 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Stc1O55183 247 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Ptger3P30557 365 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Slc6a13P31649 602 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Matn1P51942 500 aaKnown RBP13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Sim1Q61045 765 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Ttyh3Q6P5F7 524 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Tas2r3Q7TQA7 316 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Gpr89aQ8BS95 455 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Slco2b1Q8BXB6 683 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Nadk2Q8C5H8 452 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Batf2Q8R1H8 277 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Dhrs7bQ99J47 323 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 AmnQ99JB7 458 aaKnown RBP13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Bhlhe41Q99PV5 410 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Sult1c2Q9D939 296 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Pard6gQ9JK84 382 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Dclk1Q9JLM8 756 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Tcf7l1Q9Z1J1 584 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Gm10479K7N6H4 105 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 BckdkO55028 412 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Cd28P31041 218 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Tas2r123P59528 333 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 JrkQ60976 557 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Adh7Q64437 374 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Olfr1036Q7TR85 310 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Lamp3Q7TST5 411 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Npas4Q8BGD7 802 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Zfp189Q8BKP2 608 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Chrnb3Q8BMN3 464 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Piwil4Q8CGT6 848 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 PvrQ8K094 408 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Lcn9Q9D267 178 aa13.5□□□□□ -0.25
Col3a1-201ENSMUST00000087883 TtpalQ9D3D0 343 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms