RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 SpdefQ9WTP3 325 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cdh13Q9WTR5 714 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ramp2Q9WUP0 189 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Taf1Q80UV9 1891 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ltbp4Q8K4G1 1666 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1223A0A1L1SU13 311 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fam46dB1ATX6 390 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hpse2B2RY83 592 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm42957D6RFQ2 366 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 4933402N22RikF7D1B3 190 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Serpinb9cI7HJI5 387 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Dhx15O35286 795 aaKnown RBP9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 UgcgO88693 394 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 FpgsP48760 587 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Dsc1P55849 886 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Taf1aP97357 453 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 B4galnt2Q09199 510 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Aarsd1Q3THG9 412 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pde12Q3TIU4 608 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Dcp1bQ3U564 578 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Bod1Q5SQY2 173 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Uimc1Q5U5Q9 727 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 MarcoQ60754 518 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tgoln2Q62314 363 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Churc1Q6DG52 112 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Sult1c1Q80VR3 304 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc43a1Q8BSM7 564 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cdk5rap1Q8BTW8 588 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hat1Q8BY71 416 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cnot2Q8C5L3 540 aaKnown RBP9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr561Q8VGZ6 314 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 NlnQ91YP2 704 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 B3galnt1Q920V1 331 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Q9CWU4 180 aaKnown RBP9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Moxd1Q9CXI3 613 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Med18Q9CZ82 208 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hspa12bQ9CZJ2 685 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Arv1Q9D0U9 266 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 4930503E14RikQ9D583 177 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ten1Q9D7K2 161 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Prss52Q9D9M0 321 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Prl8a8Q9DAS4 241 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Abcg8Q9DBM0 673 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc38a3Q9DCP2 505 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Socs6Q9JLY0 533 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 HgfacQ9R098 653 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 CtszQ9WUU7 306 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Frmpd3A0A140LIW3 1774 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr239A0PK55 315 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fam84bD3YXJ5 310 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fam46aD3Z5S8 447 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vmn2r108E9PYS0 855 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr55K7N6Q1 315 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1564K7N6V7 318 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gfra2O08842 464 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 AmbnO55189 407 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Npy5rO70342 466 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Grem2O88273 168 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 AprtP08030 180 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 F2P19221 618 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 EpycP70186 322 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Neurog2P70447 263 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Scgb1a1Q06318 96 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 FcamrQ2TB54 535 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hectd3Q3U487 861 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Sec14l3Q5SQ27 401 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Large2Q5XPT3 690 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ddx31Q6NZQ2 687 aaKnown RBP9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Marveld1Q7TQJ1 173 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Armc12Q80X86 340 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ms4a5Q810P8 197 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mgat4aQ812G0 535 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pcid2Q8BFV2 399 aaKnown RBP9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Lig4Q8BTF7 911 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc14a2Q8R4T9 930 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Grk5Q8VEB1 590 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Zfp65Q91W94 390 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 FopnlQ9CZS3 174 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Q9DAY5 185 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 TescQ9JKL5 214 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 ItgaxQ9QXH4 1169 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Sae1Q9R1T2 350 aa9.37□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1084A0A1L1STZ9 313 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm8922F6XVS9 199 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm6460F6YJZ8 199 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm21319F6YNI8 144 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm8871F7AXK2 190 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm20441G3UYJ7 252 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Spdye4cI6XKQ3 339 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cnih2O35089 160 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Il13ra2O88786 383 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 H2-T23P06339 357 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 CebpbP28033 296 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 TtkP35761 856 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Idh2P54071 452 aaKnown RBP9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Lim2P56563 173 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cntn5P68500 1098 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 NfycP70353 335 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tarbp2P97473 365 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 XylbQ3TNA1 551 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms