RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Slc15a3Q8BPX9 578 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cyp51a1Q8K0C4 503 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn1r201Q8R262 300 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn1r234Q8R298 329 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tmem98Q91X86 226 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Exosc4Q921I9 245 aaKnown RBP10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc8b1Q925Q3 585 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Znf639Q99KZ6 485 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cstf1Q99LC2 431 aaKnown RBP10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ndufv2Q9D6J6 248 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Hspb3Q9QZ57 154 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Btaf1E9QAE3 1848 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm12800B1AUV4 484 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Clip3B9EHT4 547 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Scrg1O88745 98 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 P01668 110 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nsg2P47759 171 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 InhbbQ04999 411 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc37a3Q3TIT8 494 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gdi2Q61598 445 aaKnown RBP10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Hist2h2aa1Q6GSS7 130 aaKnown RBP10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Eri1Q7TMF2 345 aaKnown RBP10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Klhl12Q8BZM0 568 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr49Q9Z1V0 313 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Dpp6Q9Z218 804 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Myo10F8VQB6 2062 aa10.91□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ankrd12G5E893 2041 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fam71f2B2RXB0 297 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm21319F6YNI8 144 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn1r58G3X9U3 310 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Adam19O35674 920 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 AcadvlP50544 656 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Med26Q7TN02 588 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr320Q7TRZ4 306 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fbxl22Q8C7B6 236 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cdc123Q8CII2 336 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1276Q8VF40 312 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Elovl6Q920L5 267 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Dhrs1Q99L04 313 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Aldh6a1Q9EQ20 535 aaKnown RBP10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 DstnQ9R0P5 165 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ptges3Q9R0Q7 160 aaKnown RBP10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Syndig1A2ANU3 258 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr549E9Q542 316 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ruvbl1P60122 456 aaKnown RBP10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Osgepl1Q6PEB4 414 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Polr1eQ8K202 482 aaKnown RBP10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Trappc5Q9CQA1 188 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Qrsl1Q9CZN8 525 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Lingo1Q9D1T0 614 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Efhc2Q9D485 750 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cldn7Q9Z261 211 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ido1P28776 407 aaKnown RBP10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Acod1P54987 488 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 MazP56671 477 aaKnown RBP10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cpne7Q0VE82 557 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Echdc2Q3TLP5 296 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 B020004J07RikQ3UTC0 476 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ephx3Q3V1F8 367 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc26a10Q5EBI0 492 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nr2f1Q60632 422 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cpeb2Q812E0 521 aaKnown RBP10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 LdahQ8BVA5 326 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Bloc1s5Q8R015 185 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr450Q8VF81 310 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pdzd3Q99MJ6 498 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Msantd3Q9CR78 275 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Zfp773Q9CZ29 471 aa10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Celf2Q9Z0H4 508 aaKnown RBP10.9□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Sned1Q70E20 1403 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rgs5O08850 181 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Bmpr1aP36895 532 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Atxn1P54254 791 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 B4galnt2Q09199 510 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 MedagQ14BA6 303 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ccdc106Q3ULM0 279 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Il1rapQ61730 570 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr1318Q7TQW6 320 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr1197Q7TR13 314 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr1196Q7TR14 314 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 PdprQ7TSQ8 878 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Znf784Q8BI69 297 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Dlec1Q8BLA1 635 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tcf25Q8R3L2 676 aaKnown RBP10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr1317Q8VF84 316 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Adgrl4Q923X1 739 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cmss1Q9CZT6 276 aaKnown RBP10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rps19Q9CZX8 145 aaKnown RBP10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 LhppQ9D7I5 270 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tvp23bQ9D8T4 205 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr630Q9EQQ7 319 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cpne6Q9Z140 557 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cldn8Q9Z260 225 aa10.9□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Aldh3b3J3QMK6 479 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 CskP41241 450 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Hesx1Q61658 185 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr1051Q7TR76 308 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 PstkQ8BP74 359 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gpr158Q8C419 1200 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rfwd3Q8CIK8 774 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms