RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Uhrf1Q8VDF2 782 aaKnown RBP16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Nt5c1aA3KFX0 365 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Fam46aD3Z5S8 447 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 PhyhO35386 338 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Alox12P39655 663 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Arf5P84084 180 aaKnown RBP16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 CpeQ00493 476 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Fbxw18Q3TSA9 469 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Znf865Q3U3I9 1058 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Tas2r3Q7TQA7 316 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Olfr169Q7TS53 313 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Q810M1 233 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Phf11aQ8BVM9 293 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Teddm1bQ8CC62 306 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Agr3Q8R3W7 165 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Olfr398Q8VFY0 314 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Fuca2Q99KR8 461 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Serpini2Q9JK88 405 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Stub1Q9WUD1 304 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Numa1E9Q7G0 2094 aaKnown RBP16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Anapc1P53995 1944 aaKnown RBP16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm29776A0A286YEC0 699 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Tyw5A2RSX7 315 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm3278L7N2D2 218 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 FhitO89106 150 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Timm13P62075 95 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 NficP70255 439 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ccdc190Q3URK1 288 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 MuskQ61006 868 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Olfml2aQ8BHP7 681 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Mon1bQ8BMQ8 553 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Znf428Q8C1M2 176 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Rbm47Q91WT8 590 aaKnown RBP16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 HraslsQ9QZU4 167 aa16.18■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm4779A0A1B0GR91 561 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 A0A286YDM2 672 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Slc32a1O35633 525 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 E330014E10RikQ3UL33 481 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 D5Ertd577eQ499F0 481 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Wbp4Q61048 376 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Olfr728Q7TRM6 311 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 LppQ8BFW7 613 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ptges2Q8BWM0 384 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Fam131aQ8BWU3 361 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Map2k7Q8CE90 535 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 TrhdeQ8K093 1025 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Fam129bQ8R1F1 749 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Acot7Q91V12 381 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Cyp4f3Q99N16 524 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ccdc107Q9DCC3 242 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm15013V9GWY0 266 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ttll2A4Q9E4 540 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ccdc7bE9Q9Y3 381 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm10338K7N692 204 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Nr4a1P12813 601 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Cdh26P59862 763 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Eif2b4Q61749 524 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Enpp6Q8BGN3 440 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ifnl3Q8CGK6 193 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Vmn1r22Q8R2D1 302 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Slc38a3Q9DCP2 505 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Bmp10Q9R229 421 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm13178B1AVU7 408 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm10112D3YWP5 117 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Apol11bE9PUZ0 337 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Mapk12O08911 367 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Hmgn1P18608 96 aaKnown RBP16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Coq7P97478 217 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Tapt1Q4VBD2 564 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Igfbp7Q61581 281 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 SypQ62277 314 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 1700001J03RikQ80ZR8 219 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Slitrk4Q810B8 837 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 AgmoQ8BS35 447 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Vmn1r192Q8K4C9 300 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gipc3Q8R5M0 297 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Nae1Q8VBW6 534 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Lipt1Q8VCM4 373 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gorasp2Q99JX3 451 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Trmt11Q9CWH5 460 aa16.17■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Zfp472B0V2W5 534 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Vmn2r75G5E8Z7 853 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Sbk2P0C5K1 362 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Mup4P11590 178 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Serpine1P22777 402 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Apba2P98084 750 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Mmp11Q02853 492 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Fzd4Q61088 537 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Olig3Q6PFG8 273 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Olfr744Q7TRM0 323 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Creg2Q8BGC9 288 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Pan2Q8BGF7 1200 aaKnown RBP16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Med17Q8VCD5 649 aaKnown RBP16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Hemk1Q921L7 340 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Fam174aQ9D3L0 190 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Tmem37Q9JJV3 211 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Aadacl2B2RWD2 401 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Lrr1D3YY91 422 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Adh6aE9Q5Z6 375 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ppm1bP36993 390 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms