RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 AnkhQ9JHZ2 492 aa13.97□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Dbf4Q9QZ41 663 aa13.97□□□□□ -0.17
Ercc1-201ENSMUST00000003645 VapaQ9WV55 249 aaKnown RBP13.97□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Gdf2Q9WV56 428 aa13.97□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Keap1Q9Z2X8 624 aaKnown RBP13.97□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Gm35315A0A1B0GRI2 571 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Gm14295A2BG91 834 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Gm6811E9Q3Y8 510 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Wisp1O54775 367 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Gpld1O70362 837 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Tcn2O88968 430 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 F2P19221 618 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 HexaP29416 528 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Egfbp2P36368 261 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Atp6v1b2P62814 511 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Atp5a1Q03265 553 aaKnown RBP13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Col9a1Q05722 921 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Mmp25Q3U435 615 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Pitpnm3Q3UHE1 974 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Rbm44Q3V089 1013 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Proser1Q5PRE5 913 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Map3k7Q62073 579 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Cr1lQ64735 483 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Atg4dQ8BGV9 474 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Larp4Q8BWW4 719 aaKnown RBP13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Gk5Q8BX05 534 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Ikzf4Q8C208 586 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Nckap1lQ8K1X4 1134 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Tubg2Q8VCK3 451 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Olfr1233Q8VGN0 305 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Pcdhga6Q91XY2 932 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Krcc1Q99JT5 256 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Hspa14Q99M31 509 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Trap1Q9CQN1 706 aaKnown RBP13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Khdc3Q9CWU5 440 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Zswim1Q9CWV7 455 aaKnown RBP13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Yae1d1Q9DAY6 216 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Emc7Q9EP72 241 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Rcan2Q9JHG2 197 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Lbx2Q9WUN8 195 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Rhox2dW4VSN9 191 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Sdk2Q6V4S5 2176 aa13.96□□□□□ -0.17
Ercc1-201ENSMUST00000003645 Syndig1A2ANU3 258 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Catsperg1E9Q355 1151 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Ppt2O35448 302 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Ift81O35594 676 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Btnl2O70355 454 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Prim2P33610 505 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 FahP35505 419 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Slc19a1P41438 512 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Fmo1P50285 532 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Limk1P53668 647 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 EvlP70429 414 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Tex10Q3URQ0 928 aaKnown RBP13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Trp53i11Q4QQM4 189 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Capn3Q64691 821 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Tmbim1Q8BJZ3 309 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Ablim2Q8BL65 612 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Ythdf3Q8BYK6 585 aaKnown RBP13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Lrif1Q8CDD9 755 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Trim31Q8R0K2 507 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Gsg1Q8R1W2 324 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Lrrc61Q8R2R5 259 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Mospd1Q8VEL0 213 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 MydgfQ9CPT4 166 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Dnase1l1Q9D7J6 314 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Ppa1Q9D819 289 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Clec2iQ9WVF9 217 aa13.96□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Lgr4A2ARI4 951 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 4931406B18RikA2RSL7 367 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Ccdc62E9PVD1 701 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 1700017D01RikG5E851 209 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Grap2O89100 322 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Il1r2P27931 410 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Atxn1P54254 791 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Entpd1P55772 510 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Tra2bP62996 288 aaKnown RBP13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Lemd1Q14C37 129 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Acss3Q14DH7 682 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Zfp956Q3UZY6 572 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Krtcap2Q5RL79 136 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Pla2g7Q60963 440 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Doc2aQ7TNF0 405 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Olfr527Q7TRT9 305 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Rbbp8Q80YR6 893 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Tex13c3Q810P0 219 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Serinc5Q8BHJ6 461 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 TxlngQ8BHN1 524 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Sept11Q8C1B7 431 aaKnown RBP13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Tbl3Q8C4J7 801 aaKnown RBP13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Slc46a2Q8CA03 479 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Pgm2l1Q8CAA7 621 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Upp2Q8CGR7 320 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Vps37cQ8R105 352 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Olfr1512Q8VF72 313 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Olfr1378Q8VGH0 315 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Vps11Q91W86 941 aaKnown RBP13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Tmem63aQ91YT8 804 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Grip1Q925T6 1127 aa13.95□□□□□ -0.18
Ercc1-201ENSMUST00000003645 Scd3Q99PL7 359 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms