RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 C1orf189Q5VU69 101 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 TMPRSS12Q86WS5 348 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 TMEM132CQ8N3T6 1108 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 ZCCHC7Q8N3Z6 543 aaKnown RBP16.56■□□□□ 0.24
PHGDH-230ENST00000641927 C16orf78Q8WTQ4 265 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 CLIP3Q96DZ5 547 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 MMABQ96EY8 250 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-230ENST00000641927 SLC45A3Q96JT2 553 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 EGLN2Q96KS0 407 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 RTKNQ9BST9 563 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 SRPK3Q9UPE1 567 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 PLD2O14939 933 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 AKAP10O43572 662 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 FOXS1O43638 330 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 RDH16O75452 317 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 NTRK1P04629 796 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 UFM1P61960 85 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 EIF3IQ13347 325 aaKnown RBP16.56■□□□□ 0.24
PHGDH-230ENST00000641927 PDCD4Q53EL6 469 aaKnown RBP16.56■□□□□ 0.24
PHGDH-230ENST00000641927 YOD1Q5VVQ6 348 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-230ENST00000641927 NIPAL1Q6NVV3 410 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 PAOXQ6QHF9 649 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 FAM9CQ8IZT9 166 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 EFCAB3Q8N7B9 438 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 ERP27Q96DN0 273 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 DPY30Q9C005 99 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 BRINP2Q9C0B6 783 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 SDR39U1Q9NRG7 319 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-230ENST00000641927 ENAMQ9NRM1 1142 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 MAU2Q9Y6X3 613 aa16.56■□□□□ 0.24
PHGDH-230ENST00000641927 A0A1B0GX78 115 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 PMS2P1A4D2B8 440 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 PSMD12O00232 456 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-230ENST00000641927 DSCR3O14972 297 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 NSA2O95478 260 aaKnown RBP16.55■□□□□ 0.24
PHGDH-230ENST00000641927 IL3P08700 152 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 ETV5P41161 510 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 ASMTP46597 345 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 ATP4BP51164 291 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 RAB15P59190 212 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.55■□□□□ 0.24
PHGDH-230ENST00000641927 DCAF12Q5T6F0 453 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 GPR180Q86V85 440 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 CPSF7Q8N684 471 aaKnown RBP16.55■□□□□ 0.24
PHGDH-230ENST00000641927 KRTCAP2Q8N6L1 136 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 OR5T3Q8NGG3 340 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 OR9I1Q8NGQ6 314 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 WDR36Q8NI36 951 aaKnown RBP16.55■□□□□ 0.24
PHGDH-230ENST00000641927 MAPKAP1Q9BPZ7 522 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 ZNF385DQ9H6B1 395 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 MRGBPQ9NV56 204 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 LYARQ9NX58 379 aaKnown RBP16.55■□□□□ 0.24
PHGDH-230ENST00000641927 CCDC167Q9P0B6 97 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 HCN3Q9P1Z3 774 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 SATB2Q9UPW6 733 aa16.55■□□□□ 0.24
PHGDH-230ENST00000641927 KIF26BQ2KJY2 2108 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 CEP250Q9BV73 2442 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 C9JVG2 144 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 DNAJB6O75190 326 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 GUCY1B2O75343 617 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 SLC22A3O75751 556 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 SCELO95171 688 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 GPX3P22352 226 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 OR1D4P47884 311 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 HNRNPH2P55795 449 aaKnown RBP16.54■□□□□ 0.24
PHGDH-230ENST00000641927 MAT1AQ00266 395 aaKnown RBP16.54■□□□□ 0.24
PHGDH-230ENST00000641927 C2orf80Q0P641 193 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 RUNX2Q13950 521 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 AGKQ53H12 422 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 CEACAM20Q6UY09 585 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 CLNKQ7Z7G1 428 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 MARCH9Q86YJ5 346 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 FITM2Q8N6M3 262 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 PMEPA1Q969W9 287 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 COL26A1Q96A83 441 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 TM4SF18Q96CE8 201 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 MVB12AQ96EY5 273 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 ZBTB18Q99592 522 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 YIPF2Q9BWQ6 316 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 MYLK2Q9H1R3 596 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 MYNNQ9NPC7 610 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 TEX10Q9NXF1 929 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-230ENST00000641927 CDC14AQ9UNH5 594 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 ATG4BQ9Y4P1 393 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 PCDHB3Q9Y5E6 796 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 CAPN7Q9Y6W3 813 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 SPACA6W5XKT8 324 aa16.54■□□□□ 0.24
PHGDH-230ENST00000641927 H0YIG0 161 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 HBQ1P09105 142 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 ALDH9A1P49189 494 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 LIM2P55344 173 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 CLDN8P56748 225 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 TRA2BP62995 288 aaKnown RBP16.53■□□□□ 0.24
PHGDH-230ENST00000641927 IRX1P78414 480 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-230ENST00000641927 MC1RQ01726 317 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 KLF10Q13118 480 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 RHBDD2Q6NTF9 364 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 GALNT15Q8N3T1 639 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 ADAMTS14Q8WXS8 1223 aa16.53■□□□□ 0.24
PHGDH-230ENST00000641927 TEX37Q96LM6 180 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms