RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 PCDHGA12O60330 932 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 IFNA14P01570 189 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 SYN1P17600 705 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 FEN1P39748 380 aaKnown RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 CBX5P45973 191 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 OR1E2P47887 323 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 CDH12P55289 794 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 SLC9A5Q14940 896 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 TMEM81Q6P7N7 255 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 CYS1Q717R9 158 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 GAREM2Q75VX8 874 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 PRSS48Q7RTY5 328 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 DGLUCYQ7Z3D6 616 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 TTLQ8NG68 377 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 ARRDC2Q8TBH0 407 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 C11orf24Q96F05 449 aaPredicted RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 IMP4Q96G21 291 aaKnown RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 DPH2Q9BQC3 489 aaPredicted RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 TBC1D17Q9HA65 648 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 KLHL1Q9NR64 748 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 HPF1Q9NWY4 346 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 TRPM5Q9NZQ8 1165 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 UBQLN2Q9UHD9 624 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 H7C2Y5 167 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 SGCEO43556 437 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 SGTAO43765 313 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 SOX14O95416 240 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 RGS6P49758 472 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 EPHA5P54756 1037 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 PRKCDQ05655 676 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 CRYZQ08257 329 aaKnown RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 GANABQ14697 944 aaKnown RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 MAD2L1BPQ15013 274 aaPredicted RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 CRTC2Q53ET0 693 aaPredicted RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 OR2T5Q6IEZ7 315 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 ZNF549Q6P9A3 640 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 DOK6Q6PKX4 331 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 RANBP10Q6VN20 620 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 TEX26Q8N6G2 289 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 ARL14EPQ8N8R7 260 aaPredicted RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 NLGN4YQ8NFZ3 816 aaPredicted RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 OR2T29Q8NH02 315 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 ING5Q8WYH8 240 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 ZFP3Q96NJ6 502 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 ZNF416Q9BWM5 594 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 SP110Q9HB58 689 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 DNAJC27Q9NZQ0 273 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 RHCGQ9UBD6 479 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 SPASTQ9UBP0 616 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 CMAHPQ9Y471 501 aa11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 PCDHGA9Q9Y5G4 932 aaKnown RBP11.39□□□□□ -0.59
RBFOX1-224ENST00000641259 SSX5O60225 188 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 RGRP47804 291 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 WNT3AP56704 352 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 HERVK_113P63132 956 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 SPIBQ01892 262 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 CAMK2GQ13555 558 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 CPSF6Q16630 551 aaKnown RBP eCLIP11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 MARC1Q5VT66 337 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 TMEM65Q6PI78 240 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 SLC13A3Q8WWT9 602 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 RNFT2Q96EX2 444 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 ERVK-6Q9BXR3 956 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 SERHL2Q9H4I8 314 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 TLR9Q9NR96 1032 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 THUMPD1Q9NXG2 353 aaKnown RBP11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 PFDN2Q9UHV9 154 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 DENND4CQ5VZ89 1909 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 CDC7O00311 574 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 IFRD1O00458 451 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 PRSS56P0CW18 603 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 DRD5P21918 477 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 DNASE1P24855 282 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 RPS19P39019 145 aaKnown RBP11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 KIR2DL3P43628 341 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 HTR6P50406 440 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 BCL2L1Q07817 233 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 RGS1Q08116 209 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 C19orf57Q0VDD7 668 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 ANGPT1Q15389 498 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 HKDC1Q2TB90 917 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 TMEM240Q5SV17 173 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 C10orf62Q5T681 223 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 ALKAL2Q6UX46 152 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 GPRIN3Q6ZVF9 776 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 TRIM69Q86WT6 500 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 WFDC5Q8TCV5 224 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 DNAJA4Q8WW22 397 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 SMG9Q9H0W8 520 aaKnown RBP11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 AAR2Q9Y312 384 aaKnown RBP11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 TCRBV5S2A0A599 114 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 PRAMEF11O60813 436 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 RFPL3O75679 317 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 ALPIP09923 528 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 CTSAP10619 480 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 MYOGP15173 224 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 ALAS2P22557 587 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 HTR1EP28566 365 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 VIPR1P32241 457 aa11.38□□□□□ -0.59
RBFOX1-224ENST00000641259 NUDT1P36639 197 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms