RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 RAG2P55895 527 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CSTF1Q05048 431 aaKnown RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 FGL1Q08830 312 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 MAP4K2Q12851 820 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 GPR68Q15743 365 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SNAPC1Q16533 368 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 ARHGAP15Q53QZ3 475 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 IL31Q6EBC2 164 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SLC27A4Q6P1M0 643 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CNIH2Q6PI25 160 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 BHLHB9Q6PI77 547 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 Q6ZPB1 254 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 LIX1Q8N485 282 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 TEX47Q8TBZ9 253 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SH3RF2Q8TEC5 729 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 C7orf34Q96L11 122 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 ABCC13Q9NSE7 274 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 TAS2R13Q9NYV9 303 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 ACTR10Q9NZ32 417 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 EPHA6Q9UF33 1036 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 PFDN2Q9UHV9 154 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 ZNF222Q9UK12 451 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 GINS2Q9Y248 185 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CCL27Q9Y4X3 112 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SCN1AP35498 2009 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 I6L893 689 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 HAS3O00219 553 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SLC28A1O00337 649 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 HBP1O60381 514 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CSO75390 466 aaKnown RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 IFNA4P05014 189 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 DNASE1P24855 282 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 PTPN6P29350 595 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SSTR4P31391 388 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 RPL35P42766 123 aaKnown RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 IDH2P48735 452 aaKnown RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CLCN7P51798 805 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 DAOAP59103 153 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 DCDC1P59894 354 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CDC42P60953 191 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 PLIN5Q00G26 463 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 DSG2Q14126 1118 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 NCF4Q15080 339 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 ZBTB6Q15916 424 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SLC39A12Q504Y0 691 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SPANXN4Q5MJ08 99 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 HACD4Q5VWC8 232 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CHMP1BQ7LBR1 199 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 MCATQ8IVS2 390 aaKnown RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 C10orf111Q8N326 155 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CAMKVQ8NCB2 501 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 PROKR2Q8NFJ6 384 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 IMP4Q96G21 291 aaKnown RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 HSH2DQ96JZ2 352 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 UROC1Q96N76 676 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 MS4A7Q9GZW8 240 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CRISPLD1Q9H336 500 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 WDCPQ9H6R7 721 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SLC25A19Q9HC21 320 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 BRD7Q9NPI1 651 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 SERHLQ9NQF3 203 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 RBM22Q9NW64 420 aaKnown RBP eCLIP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 CLN6Q9NWW5 311 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 NUDT4Q9NZJ9 180 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 COPZ2Q9P299 210 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 MARCH4Q9P2E8 410 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-221ENST00000638141 POMT2Q9UKY4 750 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 PADI2Q9Y2J8 665 aa11.53□□□□□ -0.56
CAPN3-221ENST00000638141 OR6C65A6NJZ3 312 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 ISM1B1AKI9 464 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 E2F3O00716 465 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 RGS14O43566 566 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 AKAP8O43823 692 aaKnown RBP11.52□□□□□ -0.57
CAPN3-221ENST00000638141 LZTS3O60299 673 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-221ENST00000638141 SULT1A3P0DMM9 295 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 SULT1A4P0DMN0 295 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 ITPKAP23677 461 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 KDELR2P33947 212 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 INPP1P49441 399 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 CENPAP49450 140 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 STK19P49842 368 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-221ENST00000638141 ACLYP53396 1101 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 ERVPABLB-1P60509 514 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 CDH18Q13634 790 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 RFTN2Q52LD8 501 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-221ENST00000638141 SPIN4Q56A73 249 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 FAM26DQ5JW98 314 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 AFMIDQ63HM1 303 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 KIAA0907Q7Z7F0 614 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-221ENST00000638141 CELF6Q96J87 481 aaKnown RBP11.52□□□□□ -0.57
CAPN3-221ENST00000638141 KCTD7Q96MP8 289 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 OR52E6Q96RD3 313 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 MAPKAP1Q9BPZ7 522 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 H2AFJQ9BTM1 129 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 RBCK1Q9BYM8 510 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 SLC29A3Q9BZD2 475 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 OR51J1Q9H342 316 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 GAREM1Q9H706 876 aa11.52□□□□□ -0.57
CAPN3-221ENST00000638141 DDIT4Q9NX09 232 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms